Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01740 ATGGCAGCTGCGCCATCGGCGGTGTCTGTGAACGGAGTGAAGATAGGGACGACATCGCAAGCATACCTGGAAAGCAAGGCAGTGAAGGAGACCAAAACTTTGGTATCTGAACTCTGTCGCCAGTTCTACACTCTTGGATGGGTCTCAGGGACTGGTGGCAGCATCACTATCAAGGTCCATGATGACTCCATCCCGAAATCAGAGCAGCTTATAATCATGTCCCCTTCAGGTGTTCAGAAGGAAAGAATGGAGCCAGAGGACATGTATGTCATATCCCCAGATGGATCAACCTTGTTTACTCCGTCTCCAAAACCTTACCCGCATAAACCTCCCAAGTGTTCTGATTGTGGTCCACTTTTTATGAAGgcATATGAGATGCGTGATGCTGGGGCTGTTATCCACAGTCATGGAATAGAATCTTGTCTTGTAACGATGATCAATCCTTTATCAAAGGAATTTCGAATCACTCACATGGAAATGATAAAAGGAATCAAGGGGCATGGTTATTATGATGAACTAGTTGTTCCCATAATAGAGAACACTGCCTATGAATATGAGCTGACAGAATCTCTTGCTAAAGCTATTGAAGCCTACCCTAAAACAACAGCAGTGTTGGTTCGCAACCACGGGATATATGTTTGGGGAGACACGTGGATTAGTGCTAAAACCCAGTCTGAGTGCTACCACTACCTCTTTGATGCTGCTCTCAAGCTTCACCAATTGGGATTGGACTGGACTACTCCTGACCATGGTCCAATACAAAGTGTTAGAGGTGTTCCAAGGACTGTTTGTGGATCGAATGTATCAGCTAAGGCACAAAAAACTAACCATGAAGTTGAACCATTGCCACGTTGTATTCTTCTTGACATTGAAGGGACCACTACTCCCATATCATTTGTTTCAGAGGTTCTCTTCCCTTATGCACGTAATAATGTTGGGAGGCATCTATCTGCCACATACAATACTACAGACACTCAAGATGATATTAAGTTGCTTCGATCCCAAGTTCAAAGTGACCTTGAACAAGGGGTTGAGGGTGCTTTGCCCATTCCTTCAGATGATGCAGGGAAAGAGGAAGTGATTGCGGCTTTGGTTGCCAATGTAGAAGCAATGATTAAAGCTGACAGAAAGATCACTGCCTTGAAACAGTTGCAAGGTCACATATGGAGAACTGGTTATGAGAATAATGAATTGGAGGGGGTTGTTTTTGATGATGTGCCAGAAGCACTGGAAAAGTGGAGTGCCTTGGGCATAAAGGTATACATCTATTCTAGTGGTAGTAGGTTGGCGCAGAGACTAATATTTGGAAAAACAAGTCATGGGGAcctaagaaaatatttatctgGGTTTTTTGACACCACAGTGgggaacaaaagagaaacacGCAGTTATGTTGAGATTTCTGAGTCGCTTGGCGTAGACAAGTCAtctgatattttctttgtcaCAGATGTTTTCCAAGAAGCTACAGCTGCAAAGGCAGcagGCTTGGAGGTGGTAATTTCTATTCGGCCAGGAAATGGACCTCTTCCTGAAAAACATGGGTTCAAGACAGTCACTTCCTTTTCAGAGATCTG 1577 0.4261 MAAAPSAVSVNGVKIGTTSQAYLESKAVKETKTLVSELCRQFYTLGWVSGTGGSITIKVHDDSIPKSEQLIIMSPSGVQKERMEPEDMYVISPDGSTLFTPSPKPYPHKPPKCSDCGPLFMKAYEMRDAGAVIHSHGIESCLVTMINPLSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYEYELTESLAKAIEAYPKTTAVLVRNHGIYVWGDTWISAKTQSECYHYLFDAALKLHQLGLDWTTPDHGPIQSVRGVPRTVCGSNVSAKAQKTNHEVEPLPRCILLDIEGTTTPISFVSEVLFPYARNNVGRHLSATYNTTDTQDDIKLLRSQVQSDLEQGVEGALPIPSDDAGKEEVIAALVANVEAMIKADRKITALKQLQGHIWRTGYENNELEGVVFDDVPEALEKWSALGIKVYIYSSGSRLAQRLIFGKTSHGDLRKYLSGFFDTTVGNKRETRSYVEISESLGVDKSSDIFFVTDVFQEATAAKAAGLEVVISIRPGNGPLPEKHGFKTVTSFSEI 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01740 525 Pfam haloacid dehalogenase-like hydrolase 284 496 - -
Bva07g01740 525 TIGRFAM salvage_mtnB: methylthioribulose-1-phosphate dehydratase 36 241 IPR017714 GO:0005737|GO:0019509|GO:0046872
Bva07g01740 525 Gene3D - 297 392 - -
Bva07g01740 525 SFLD enolase-phosphatase 284 524 IPR023943 GO:0000287|GO:0019509|GO:0043874
Bva07g01740 525 SUPERFAMILY AraD/HMP-PK domain-like 29 250 IPR036409 -
Bva07g01740 525 Pfam Class II Aldolase and Adducin N-terminal domain 35 235 IPR001303 -
Bva07g01740 525 SUPERFAMILY HAD-like 284 525 IPR036412 -
Bva07g01740 525 SFLD Haloacid Dehalogenase 284 524 - -
Bva07g01740 525 Gene3D - 28 252 IPR036409 -
Bva07g01740 525 Hamap Methylthioribulose-1-phosphate dehydratase [APIP]. 20 244 IPR027514 GO:0005737|GO:0019509|GO:0046872
Bva07g01740 525 SMART Aldolase_II_2 33 236 IPR001303 -
Bva07g01740 525 Gene3D - 393 525 IPR023214 -
Bva07g01740 525 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 7 525 IPR017714 GO:0005737|GO:0019509|GO:0046872
Bva07g01740 525 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 7 525 - -
Bva07g01740 525 Hamap Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1. 20 525 IPR027505 -
Bva07g01740 525 TIGRFAM enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 284 523 IPR023943 GO:0000287|GO:0019509|GO:0043874
Bva07g01740 525 CDD HAD_EP 285 506 IPR023943 GO:0000287|GO:0019509|GO:0043874
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01740 Bva-Chr7 16138237 16142833 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01740 K16054 - gmx:100796209 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01740 07 16138237 16142833 Bva07g01740 07 16138237 16142833 ECH