Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01692 ATGAGGAAATTCTCAGCACcagctttcttctctttcgttgtttttttagttttagtggCTAAGGTTGAAAGCCGTTTTCTGAGAAGCAATGTTTCTGAATTGGTATCAGATGGAGTTGATGGTGGAAAACCCAACAAGGATTCCTCTTACTTGCTTCTCAAGGGGATTGAATCATctgagagtgagagagagtgTGAGCAGATGTATGGGTTCTTGCCATGTTCAACCAGCATTTATGGTCATCTCTTCCTGGTTCTGGTATATGAGTACTTACTCTTCCATGGAGAATCTTATTTGGCTGCTGGTGGCAAGCAAATCTTTGCAATGCTTGGTCCTGGTGTCTTTGGGGCAAGTGCCTTTGATATTCTTGGTGCTCTTCCAGAGTCCTTGATTCTTCTAGCTTCTGGACTTTCTAGTAATAATGAGAAAGCACAAGACTATGCTACTACTGGTGTTGGCTTGCTGGCTGGATCATCCATCTTGCTTCTGACAGTGGTTTGGGGAACATGTGTTATCATTGGCAAGCAACAATTCAAGACTGATTCTGGAGACTACAATTGCCCAAATTCATGTGGAGGCTTAAAAGCATTACTGACTGGTAGTGGTATTACTACAAATTTTGAGACTACCCAGATGGCAAGAATCATGGTTCTCTCAGTCATACCACCTGTGATAATGCAGATaccaaatattttcaatttctcttctGGGCCACGCAGCTTGACCTTTCTGATTGCTCTCCTCATCACCATCCTTTTTCTCATCCTGTACTTGGCTTACCAGATCTTTGAacctcatatatataaaattataagactgGAATATGTGGAACATGATCACCTAATACTAAAAATTGTACAACATGCTCCAAAGCATACCCTGCAAAGTATCCTCACTGAGAATGGAACTCCCAATGAAAGTGCCATAGTGAGACTGTTCAATGTAATAGATAAAAATGGGGATGGTGAGATATCAGCTTCTGAAATAAAGGAGCTGCTGCTTAGAACCAGATTAACTGAAGCAAAGACCAATGAGGAGAATGATGTAGAACAggtgtttaaaatatttgaccAGGATGGTGACAAAAGAATAAGCAAAGAGGAATTTGTGAATGGCTTCAAAACATGGCTTGACCAAACAAAGCATGCTCTGGACAAACAGTTCCtgtcaagaaaaaaacagaCCAACGTATACCAGGTTGTCAAGCCCtggattgaaaagaaaagacacgAACGGGAAATGAGGAAACATCTTAAAACTGAACTCTTAAGGAAAGTTAAAAGTGATATGGTTGCCAGCCATTTCATAAATGAGGGAACAGATGAAGAACATGCTATCCAAAGGTTGTTCGAGAAAATTGACAGCAATAAAGACAACCAAATTTCACAAGCTGAGTTAAGAGAACTAATCATGAATATCAAGCCTGATATGAATTCACAAGATGTGGAAGAAGCACTTGGAAAAATTACACAAGAACTTGACGTTAATCATGACAGCGAAATCAGCGAGGAGGAATTTCTTGCTGTGGTTAAAAAATGGCTTCGCTCATCCCCCAGTCATTCTCCTCTATCATATTCAGAGTCTCAAGAAGAAATTCACCCAGTCTGGGAAAGAGTTGAAAAGGTGGTTGAAGAGAATCAGAAAAAAGGACTAGTTGCATGGTTGAAGGCTATAATGAATGCGGTGATAGGAATTGCAATGGTATCAGTTCTTGCAGAGCCCCTAATAGAAAGTGTCCAGAATTTCTCACGAAGTGCAGGAATTTCATCTTTCTTGATCTCTTTCATTTTAGTCCCATTAGCCATAAATGCCAGAGAAGCAAGCTTGGCATTCAAGGAAGCTAGCcacaagaagaaatataaCACTTCTGAAACAATTTATGAGATTTATGATGCAGTCTTCATGAACAATACTATTGGCTTCTTTGCAATTGCAATTCTGATAGATGTGCGAcaagtcacatgggaattctCAGCTGAAGTATTGGTTGTGGCAATTGTCTGTGCTATAATTGGCCTGGCTGCAAGTTTTTCCTCCAAGTTTCCTCTATGGACATCATTTTGTGCTTATCTCCTATACCCTTTATCTTTGGTTTTGGCATATGTCCTAACTCATGTTGTGCATTATGGTTA 2132 0.3673 MRKFSAPAFFSFVVFLVLVAKVESRFLRSNVSELVSDGVDGGKPNKDSSYLLLKGIESSESERECEQMYGFLPCSTSIYGHLFLVLVYEYLLFHGESYLAAGGKQIFAMLGPGVFGASAFDILGALPESLILLASGLSSNNEKAQDYATTGVGLLAGSSILLLTVVWGTCVIIGKQQFKTDSGDYNCPNSCGGLKALLTGSGITTNFETTQMARIMVLSVIPPVIMQIPNIFNFSSGPRSLTFLIALLITILFLILYLAYQIFEPHIYKIIRLEYVEHDHLILKIVQHAPKHTLQSILTENGTPNESAIVRLFNVIDKNGDGEISASEIKELLLRTRLTEAKTNEENDVEQVFKIFDQDGDKRISKEEFVNGFKTWLDQTKHALDKQFLSRKKQTNVYQVVKPWIEKKRHEREMRKHLKTELLRKVKSDMVASHFINEGTDEEHAIQRLFEKIDSNKDNQISQAELRELIMNIKPDMNSQDVEEALGKITQELDVNHDSEISEEEFLAVVKKWLRSSPSHSPLSYSESQEEIHPVWERVEKVVEENQKKGLVAWLKAIMNAVIGIAMVSVLAEPLIESVQNFSRSAGISSFLISFILVPLAINAREASLAFKEASHKKKYNTSETIYEIYDAVFMNNTIGFFAIAILIDVRQVTWEFSAEVLVVAIVCAIIGLAASFSSKFPLWTSFCAYLLYPLSLVLAYVLTHVVHYG 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01692 710 ProSitePatterns EF-hand calcium-binding domain. 454 466 IPR018247 -
Bva07g01692 710 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 397 517 - -
Bva07g01692 710 Gene3D - 274 388 - -
Bva07g01692 710 SUPERFAMILY EF-hand 308 513 IPR011992 -
Bva07g01692 710 ProSitePatterns EF-hand calcium-binding domain. 357 369 IPR018247 -
Bva07g01692 710 ProSiteProfiles EF-hand calcium-binding domain profile. 304 339 IPR002048 GO:0005509
Bva07g01692 710 ProSiteProfiles EF-hand calcium-binding domain profile. 344 379 IPR002048 GO:0005509
Bva07g01692 710 ProSitePatterns EF-hand calcium-binding domain. 317 329 IPR018247 -
Bva07g01692 710 Pfam EF-hand domain pair 445 510 IPR002048 GO:0005509
Bva07g01692 710 Pfam EF-hand domain pair 308 373 IPR002048 GO:0005509
Bva07g01692 710 SMART efh_1 348 376 IPR002048 GO:0005509
Bva07g01692 710 SMART efh_1 485 513 IPR002048 GO:0005509
Bva07g01692 710 SMART efh_1 308 336 IPR002048 GO:0005509
Bva07g01692 710 SMART efh_1 445 473 IPR002048 GO:0005509
Bva07g01692 710 ProSiteProfiles EF-hand calcium-binding domain profile. 441 476 IPR002048 GO:0005509
Bva07g01692 710 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 10 389 - -
Bva07g01692 710 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 550 705 - -
Bva07g01692 710 CDD EFh 313 374 IPR002048 GO:0005509
Bva07g01692 710 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 397 517 - -
Bva07g01692 710 Gene3D - 418 540 - -
Bva07g01692 710 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 10 389 - -
Bva07g01692 710 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 550 705 - -
Bva07g01692 710 Pfam Sodium/calcium exchanger protein 562 701 IPR004837 GO:0016021|GO:0055085
Bva07g01692 710 ProSiteProfiles EF-hand calcium-binding domain profile. 481 516 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01692 Bva-Chr7 15904785 15908332 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01692 397 705 EF-hand Containing Proteins AT1G53210 37.920 1.43e-59 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01692 - - gmx:100798009 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01692 07 15904785 15908332 Bva07g01692 07 15904785 15908332 ECH