Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01690 ATGGCCATTTCCACCCGTCTcgctctcttcttcttcctttcagTTCTAGTTCTGTCTGATCAATCCCATGGTCGCTTCGTGAGTAACCTTTTATCCGCTGCTTCATCTTCCTCTGATCTGCTCTCTGATGGGGTCCATGATTCCCAGAAGCCATCGGAGAGCTTGCTTCTGATCCACCGTCCATTTGGGTTCCTGTCAGAGTCTACTTGCGAGCAGACTTATGGGTTTCTGCCTTGCACCACCACTGTGATCGGAAACTTGTTCCTCATCCTCGTCTATGGCTTCCTCATGTACAAGGCTGCTACTTACTTGTCCAATGGGAGTGAGCTGCTGCTTGAGATCTTGGGGCCTGGTATTGTTGGTGGGTTGTTCCTTCCCATTCTGGGTGCGCTGCCAGACGCCATGCTCATTCTCGTATCTGGGCTTTCTGGTAGTAAAGAAACTGCTCAGAGTCAGGTCTCTGTTGGAATGGGTTTGCTGGCTGGGTCAACAACTCTTCTTTTGACTATAATATGGGGAGCCTGCGTAATTGTTGGCAAGTGTGACCTCGTGGATACAGTTGCAATAGACACCCAAGACACAAGGGGGTACAGTTTAACTGGTTCTGGTGTCAGTACTGATATTTGGACAAGTTATGCTGCAAGGATTATGGTTGTATCCGTCCTTCCATTTTTAATAGTTCAATTACCACAACTTCTCGATTCAACTTCAGGAAGGCACTTGGCTGTTTTGATTGCGCTTATTGTCTCTCTTGCTTTGTTAATCATCTATTGCCTATACcagATTTTCCAACCTTGGATACAGAGGAGAAAGCTTGCCTATGTGAAACACAAGCACGttatttttggtgttttgAGACATTTAAGGGAGCATGCATTGGGAAGGTTGCTGAAAGAGGATGGTCAACCTGACAAAGAAATCATAAAGAAGCTTTTTAAGGCAATTGATGAGAACAGCGATGGCATGCTATCTTATGGTGAATTGAAAGCGCTAGTGGTTGGAATCAAATTTGAGGAGATTGACCTGGATCATGATGAAGCTGTGCAGAAAATAATGACTGAGTTTGATACCTCTCGCAATAGTAGTGTTGAGGAAGAGGAGTTTGTAAATGGCATCTGCAGATGGATTAGAAATGCTCAGCGCCATTCTCGAGGTTTTTCTGCTGATTCCGGTGCTCGTACgatgaaatttttacataattttcacCGAGAAACAAAGAGGGAACATGATCTATTGGATGTTGGGGATCAGAGCGATGAAGTTGTTGAGGGTGTTGCAGATGCCAAATGGACTACTTTCAAAGCAGTTTTACTGCTGCTGTTGGGAACAGTTATTGCAGCAGCCTTTGCCGATCCTCTGGTTGATGCAGTTGATAACTTTTCTGATGCCACAAGCATTCctgctttcttcatttccttcattGCGCTTCCTTTGGCTACAAATGCTAGTGAAGCTGTGTCAGCAATCATCTTTGCTAGTCGTGATAAGAGACAAACCGCCTCATTAACTTTTTCCGAGCTGTATGGTGCTGTTACGATGAACAATGTGCTTTGCCTGTCAGTGTTCTTGGCCCTTGTTTATGTGAGAGGATTGACATGGGACTTCTCCTCGGAAGTATTAGTTATTCTGGTTGTTTGCATTGTGATGGGTCTGTTTGGCAGTTTCCGCACTCACTTCCCTCTCTGGACATCCATACTGGCCATCCTGCTTTATCCCTTCTCCCTGGCATTGGTCTATGTTCTTGATTATGTGTTCGGTTGGTCATA 1766 0.432 MAISTRLALFFFLSVLVLSDQSHGRFVSNLLSAASSSSDLLSDGVHDSQKPSESLLLIHRPFGFLSESTCEQTYGFLPCTTTVIGNLFLILVYGFLMYKAATYLSNGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGSKETAQSQVSVGMGLLAGSTTLLLTIIWGACVIVGKCDLVDTVAIDTQDTRGYSLTGSGVSTDIWTSYAARIMVVSVLPFLIVQLPQLLDSTSGRHLAVLIALIVSLALLIIYCLYQIFQPWIQRRKLAYVKHKHVIFGVLRHLREHALGRLLKEDGQPDKEIIKKLFKAIDENSDGMLSYGELKALVVGIKFEEIDLDHDEAVQKIMTEFDTSRNSSVEEEEFVNGICRWIRNAQRHSRGFSADSGARTMKFLHNFHRETKREHDLLDVGDQSDEVVEGVADAKWTTFKAVLLLLLGTVIAAAFADPLVDAVDNFSDATSIPAFFISFIALPLATNASEAVSAIIFASRDKRQTASLTFSELYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVILVVCIVMGLFGSFRTHFPLWTSILAILLYPFSLALVYVLDYVFGWS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01690 588 Coils Coil 587 588 - -
Bva07g01690 588 ProSiteProfiles EF-hand calcium-binding domain profile. 303 338 IPR002048 GO:0005509
Bva07g01690 588 PANTHER SODIUM/CALCIUM EXCHANGER NCL 24 585 - -
Bva07g01690 588 SMART efh_1 307 335 IPR002048 GO:0005509
Bva07g01690 588 SMART efh_1 347 375 IPR002048 GO:0005509
Bva07g01690 588 CDD EFh 308 372 IPR002048 GO:0005509
Bva07g01690 588 SUPERFAMILY EF-hand 303 375 IPR011992 -
Bva07g01690 588 Pfam EF-hand domain pair 308 370 IPR002048 GO:0005509
Bva07g01690 588 Pfam Sodium/calcium exchanger protein 435 579 IPR004837 GO:0016021|GO:0055085
Bva07g01690 588 Pfam Sodium/calcium exchanger protein 88 264 IPR004837 GO:0016021|GO:0055085
Bva07g01690 588 Gene3D - 261 389 - -
Bva07g01690 588 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 585 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bva07g01690 588 ProSitePatterns EF-hand calcium-binding domain. 316 328 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01690 Bva-Chr7 15892782 15897038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01690 22 588 EF-hand Containing Proteins AT1G53210 66.259 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01690 - - adu:107459761 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01690 07 15892782 15897038 Bva07g01690 07 15892782 15897038 ECH