Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01661 ATGAGTACTTCCAGCAGTGCTCACGGTGCTCTGGGATGGAAATCTTCCAGTTTGTTTGTACAATCCGGCTTGAATTGTAGTGGGTTCAATGTGGTTTCAGTTCCTTTCAAACCAAAATCACCCATTAGAAGATTTTCTGCGGCTTGTTCTACGTCTTCGTCTTCTTCTGATCCACTCTTGGTAAAGGCTGCCAGAGGAGATCCTGTTAGTAGGCCTCCAGCATGGATGATGCGCCAGGCAGGAAGGTACATGGCTGTTTACAGAAAGCTTGCTGAGAAATATCCATCCTTCCGAGAGAGGTCAGAGACAACTGATCTCATTGTCGAAATTTCTTTGCAGCCTTGGAAAGCTTTCAGACCTGATGGAGTAATCATTTTTTCTGACATACTTACACCTTTACCTGCATTTGGCATCCCATTTGACATAGAAGAAGTCAGGGGTCCTGTTATATCATCACCAATACGCTCTGAAGAGGGTTTAAAGTCTTTGCATCCCATTGACTTGgaaaaacttaattttgttGGAGAATCACTCAAGATACTTCGCCGGGAGgTTGGTAACCATGCTGCTGTTTTGGGTTTTGTTGGAGCACCTTGGACAATAGCAACATATATTGTGGAAGGGGGTACAACTAGGACATATACAACCATTAAAAGCATGTGCCATACTGCACCAAATGTATTGAGGACACTTCTCACTCATTTAACACAGGCTATAACGGATTACATTGTTTTCCAAGTGCAATCTGGGGCTCATTGCATACAAATATTTGATTCATGGGGTGGACAACTGCCACCAAATATGTGGGAACGCTGGTCAAAGCCTTATATTGAAGAGATTGTAAATTCGGTGAGGGTAAAATGCCCTGAAACACCACTTGTTTTGTACATAAATGGAAATGGTGGCCTACTGGAGCGTATGAAAGAAACTGGAGTTGATGTTATTGGGCTAGACTGGACAGTGGATATGGCAGATGGAAGAAAACGATTGGGAAGTAAGATAGGCGTGCAGGGAAATGTAGACCCTGCTTACTTGTTTTCCCCGCTTGATGCTTTGactgaagaaattcaaagGGTTGTGAGGGGTGCAGGACCTAGACGACACATCCTTAATCTCGGGCATGGTGTCCTTGTTGGCACACCTGAAGAAGCTGTTGCACATTTCTTTGAAGTGGCAAGGAGCTTGGATTTTGAAACACTTTTTCAAGATAAAGTTGTAGGGGAGCCTAACCTCGTAGTATG 1241 0.4295 MSTSSSAHGALGWKSSSLFVQSGLNCSGFNVVSVPFKPKSPIRRFSAACSTSSSSSDPLLVKAARGDPVSRPPAWMMRQAGRYMAVYRKLAEKYPSFRERSETTDLIVEISLQPWKAFRPDGVIIFSDILTPLPAFGIPFDIEEVRGPVISSPIRSEEGLKSLHPIDLEKLNFVGESLKILRREVGNHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPNVLRTLLTHLTQAITDYIVFQVQSGAHCIQIFDSWGGQLPPNMWERWSKPYIEEIVNSVRVKCPETPLVLYINGNGGLLERMKETGVDVIGLDWTVDMADGRKRLGSKIGVQGNVDPAYLFSPLDALTEEIQRVVRGAGPRRHILNLGHGVLVGTPEEAVAHFFEVARSLDFETLFQDKVVGEPNLVV 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01661 413 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 39 407 - -
Bva07g01661 413 CDD URO-D 62 394 IPR006361 GO:0004853|GO:0006779
Bva07g01661 413 Pfam Uroporphyrinogen decarboxylase (URO-D) 59 394 IPR000257 GO:0004853|GO:0006779
Bva07g01661 413 ProSitePatterns Uroporphyrinogen decarboxylase signature 1. 73 82 IPR000257 GO:0004853|GO:0006779
Bva07g01661 413 SUPERFAMILY UROD/MetE-like 59 396 IPR038071 -
Bva07g01661 413 Hamap Uroporphyrinogen decarboxylase [hemE]. 56 396 IPR006361 GO:0004853|GO:0006779
Bva07g01661 413 Gene3D - 48 396 IPR038071 -
Bva07g01661 413 PANTHER UROPORPHYRINOGEN DECARBOXYLASE 1, CHLOROPLASTIC 39 407 - -
Bva07g01661 413 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 192 208 IPR000257 GO:0004853|GO:0006779
Bva07g01661 413 TIGRFAM hemE: uroporphyrinogen decarboxylase 60 393 IPR006361 GO:0004853|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01661 Bva-Chr7 15733879 15736919 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01661 K01599 - gmx:100807032 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01661 07 15733879 15736919 Bva07g01661 07 15733879 15736919 ECH