Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01577 ATGGCTGCATATACCCCAAAGAATATCCTCATTACTGGGGCAGCCGGATTTATTGCATCTCATGTTGCCAACCGGCTTGTCCGGAACTACCCTCACTACAAAATTGTTGTGCTTGACAAACTTGATTACTGTTCTAATCTGAAAAACCTCCTTCCTTCCAAATCATCTCCCAACTTCAAGTTTGTGAAGGGGGATATTGGGAGTGCTGACCTTGTGAACTACCTTCTCATCACTGAGTCCATTGACACAATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGCAATAGCTTTGAGTTCACCAAGAACAACATATATGGTACTCATGTCCTATTAGAAGCCTGCAAGGTCACTGGCCAGATCACAAGATTCATTCATGTGAGCACAGATGAGGTCTATGGCGAGACAGACGAGGATGCTGTTGTGGGAAACCATGAGGCTTCCCAACTTCTTCCAACAAATCCGTACTCTGCAACCAAAGCTGGAGCAGAAATGCTTGTCATGGCATATGGGAGGTCATATGGATTGCCTGTGATCACAACACGTGGGAATAATGTTTATGGCCCCAATCAGTTTCCTGAGAAGTTGATTCCAAAGTTCATACTCTTGGCTATGCAAGGCAAGATTCTCCCAATTCATGGGGATGGTTCTAACGTGAGgagttatttatattgtgAAGATGTTGCAGAGGCTTTTGAAGTTATCCTTCACAAGGGAGAGGTTGGCCATGTTTACAATGTTGGGACTAAGAAGGAAAGGAGAGTTATTGATGTGGCCAAAGATATATGCAGACTTTTCTCCATGGATCCTGagacaaacataaaatttgtgGAGAACAGACCATTTAATGACCAGAGATACTTCCTGGATGATCAGAAGCTGAAGGTGTTGGGTTGGTCTGAGAGGACTACATGGGAAGAGGGTTTGACGAAAACCATGGAGTGGTATATCAAGAATCCTGATTGGTGGGGTGATGTCACTGGAGCATTGCTTCCTCATCCAAGGATGCTGATGATGGCCGGTGGGATGGAGAGACATTTTGATGGATCTGAAGATGAGGAACCTGCATCCTATATCTCAACCAATACTAGAATGGTGGTTCCATCACCTAAGACAGCCGGCAATCAGCAGAAACATCCTTTCAAATTCCTGATCTATGGTAGAACAGGGTGGATTGGGGGTCTGCTAGGGAAATTGTGTGAAAAACAAGGTATTCCGTATGAATACGGAAAAGGGCGTCTTGAGGATCGCTCCTCACTCATAGCAGATATTCAGAGTGTGAAGCCAACCCATGTTTTTAATGCTGCTGGAGTGACAGGCAGACCCAATGTTGATTGGTGTGAATCTCATAAAACAGAGACAATCCGCACCAATGTAGCTGGTACTTTAACCTTGGCTGATGTCTGCAGAGAGAATGGGCTCTTAATGATAAATTATGCTACCGGCTGTATATTTGAATATGACGCTGCACATCCAGAGGGATCTGGCATTGGTTTTAAGGAGGAAGACAAACCCAATTTTACTGGTTCTTTCTATTCTAAAACCAAAGCTATGGTTGAAGAACTTTTGAAGGAATACGACACTGTGTGCACTCTCAGGGTTCGCATGCCAATTTCATCTGACCTGAATAACCCACGCAACTTCATTACCAAGATCAGCCGCTACAACAAAGTGGTTAATATTCCAAACAGCATGACTATCTTGGATGAACTTCTACCTATTTCCATTGAGATGGCAAAGCGAAATTTGAGGGGCATCTGGAACTTTACAAATCCTGGGGTTGTCAGCCACAATGAGATCCTTGAGATGTACAGGGATTACATCGATCCCAACTTCAAATGGAACAACTTCACACTTGAAGAGCAAGCCAAGGTGATAGTTGCTCCACGAAGCAACAATGAGATGGATGCATCCAAGTTGAAGAAAGAGTTCCCAGAGATGCTTCCCATTAAGGAATCACTGATCAAGTATGTCTTTGAACCGAACAAGAAAACTGGGGATATTGGAAGTGCTGACCTTGTCAACTACCTTCTCGTCACTGAGTCCATTGACACAATAATGCACTTTGCTGCTCAGACCCATGTTGACAACTCCTTTGATAATAGCTTTGAGTTCACCAAGAACAACATATATGGTACTCATGTCCTATTAGAAGCCTGCAAGGTCACTGGCCAGATCACAAGATTCATTCATGTGAGCACAGATGAGGTCTATGGCGAGACAGACGAGGATGCTGTTGTGGGAAACCATGAGGCTTCCCAACTTCTTCCAACAAATCCGTACTCTGCAACCAAAGCTGGAGCAGAAATGCTTGTCATGGCATATGGGAGGTCATATGGATTACCTGTGATCACAACACGTGGGAATAATGTTTATGGGCCCAATCAGTTTCCTGAGAAGTTGATTCCAAAGTTCATCCTCTTGGCTATGCAGGGCAAGACTCTCCCAATTCATGGGGATGGTTCTAACGTGAGGAGCTATTTATATTGTGAAGATGTTGCAGAGGCTTTTGAAGTTATCCTTCACAAGGGAGAGGTCGGCCATATTTACAATATTGGGACTAAGAAGGAAAGGAGAGTTATTGATGTAGCCAAAGATATGTGCAGACTTTTCTCCATGGATCCTGAGACAAGCATAAAATTTGTGGAGAACAGACCATTTAATGACCAGAGATATTTCCTCGATGATCAGAAGCTGAAGGTGTTGGGTTGGTCTGAGAGGACCACATGGGAAGAGGGTTTGAAGAAAACTATGGAGTTGTATATCAAGAATCCTGATTGGTGGGGTGATGTCACTGGAGCATTGCTTCCTCATCCAAGGATGCTGATGATGGCTGGTGGGATGAAGAGATATTTTGAAGATGAGAAACATGCATCCTATGTGGTGGTTCGATCATCTAAAACAGCTGGTAGTCAGCAGAAACATCCTTTTAAATTCCTGATCTATGGTGGAAGAGGGTGGATTGGGGGTGTTAGGTCAAGGGTGTA 2996 0.4359 MAAYTPKNILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSNLKNLLPSKSSPNFKFVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQITRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKILPIHGDGSNVRSYLYCEDVAEAFEVILHKGEVGHVYNVGTKKERRVIDVAKDICRLFSMDPETNIKFVENRPFNDQRYFLDDQKLKVLGWSERTTWEEGLTKTMEWYIKNPDWWGDVTGALLPHPRMLMMAGGMERHFDGSEDEEPASYISTNTRMVVPSPKTAGNQQKHPFKFLIYGRTGWIGGLLGKLCEKQGIPYEYGKGRLEDRSSLIADIQSVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLTLADVCRENGLLMINYATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDTVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYRDYIDPNFKWNNFTLEEQAKVIVAPRSNNEMDASKLKKEFPEMLPIKESLIKYVFEPNKKTGDIGSADLVNYLLVTESIDTIMHFAAQTHVDNSFDNSFEFTKNNIYGTHVLLEACKVTGQITRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKTLPIHGDGSNVRSYLYCEDVAEAFEVILHKGEVGHIYNIGTKKERRVIDVAKDMCRLFSMDPETSIKFVENRPFNDQRYFLDDQKLKVLGWSERTTWEEGLKKTMELYIKNPDWWGDVTGALLPHPRMLMMAGGMKRYFEDEKHASYVVVRSSKTAGSQQKHPFKFLIYGGRGWIGGVRSRV 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01577 998 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 1 666 - -
Bva07g01577 998 Gene3D - 797 924 - -
Bva07g01577 998 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 668 995 - -
Bva07g01577 998 Gene3D - 9 313 - -
Bva07g01577 998 CDD dTDP_HR_like_SDR_e 385 657 - -
Bva07g01577 998 Pfam RmlD substrate binding domain 385 554 IPR029903 -
Bva07g01577 998 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 669 940 IPR036291 -
Bva07g01577 998 Gene3D - 200 322 - -
Bva07g01577 998 CDD dTDP_GD_SDR_e 7 324 IPR005888 GO:0008460|GO:0009225
Bva07g01577 998 Pfam GDP-mannose 4,6 dehydratase 10 315 IPR016040 -
Bva07g01577 998 Pfam GDP-mannose 4,6 dehydratase 668 920 IPR016040 -
Bva07g01577 998 CDD dTDP_GD_SDR_e 669 929 IPR005888 GO:0008460|GO:0009225
Bva07g01577 998 PANTHER TRIFUNCTIONAL UDP-GLUCOSE 4,6-DEHYDRATASE/UDP-4-KETO-6-DEOXY-D-GLUCOSE 3,5-EPIMERASE/UDP-4-KETO-L-RHAMNOSE-REDUCTASE RHM1-LIKE 668 995 - -
Bva07g01577 998 Gene3D - 668 914 - -
Bva07g01577 998 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 380 660 IPR036291 -
Bva07g01577 998 PANTHER TRIFUNCTIONAL UDP-GLUCOSE 4,6-DEHYDRATASE/UDP-4-KETO-6-DEOXY-D-GLUCOSE 3,5-EPIMERASE/UDP-4-KETO-L-RHAMNOSE-REDUCTASE RHM1-LIKE 1 666 - -
Bva07g01577 998 Gene3D - 374 665 - -
Bva07g01577 998 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 334 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01577 Bva-Chr7 15245164 15251169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01577 669 925 Miscellaneous Gene Families AT4G00110 25.362 1.30e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01577 K12450 - gmx:100803187 1275.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01577 07 15245164 15251169 Bva07g01577 07 15245164 15251169 ECH