Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01265 ATGGCCTTTCACGTAGCTTGCCCAATTACATGCCGCAAAATCTGCTTCTGTTCGCTAGGGTTTCCGCGGACCCTTCACACGCCTAAAGGGAAGGCTGAGTTTTTGGATGAGGTTGCCAAGTTGGAGGACTTTCTCAGGGACCCATGGGGAATTAGGGCTCATGACAAGGACAAAACCGTGCAAGTTGTGGTCCCTAAGGTTGTGCCGCCGCCACCGCCACCGCGCCCGTTGCAGGACCCTGTCGATGGCAGCCAAGCTGGAGATGATGAGGCTGTGTCTATGCAGGCAAAGAGGGTGGCGCTCCAGAAGAAGGGGGCGGCGGCGATGATTGCTGCTGAGGAGTATGCCAGGAAATTTGAATCAGGAGATTTGGTGGATGCAGCTGGAAACCTTACTGGAGAAGAACAGGGCCAAAAAGTCTTTTGCAGGATGTGTAATCGTCTTGAAATCGAAGGAAGTGAGAAGGCTAAAAAGATGCTTCCTTGCAAAAGTTGCGGTAAGAAGTACCATAGGAACTGCTTGAGAAGTTGGGCTCAACATAGAGATTTGTTTCATTGGAGTTCATGGACCTGCCGCAATTGCAGAATTTGTGAGGCTTGCAGAAGGCATGGAGATCCAAGTAAGTTTATGTTCTGCAAAAGGTGCGATGGTGCTTATCACTGTTATTGTTTGCAACCTCCTCATAAGAATGTTAGTTCTGGTCCCTATTTGTGCCCAAAACACACAAGATGTCACAGCTGTGGATCCAATGTCCCTGGAAATGGGCAAAGTGTAAGgtGGTTTCTTGGATACACCTGCTGTGATGCATGTGGAAGGTTGTTTGTGAAAGGGAACTACTGTCCTGTTTGCTTGAAGGTTTATAGAGATTCTGAATCAACGCCAATGGTTTGCTGTGATATGTGTCAGCGCTGGGTGCATTGTCAGTGTGATAATATTAGTGATGAGAAATATCTCCAATTTCAAGTGGATGGGAATCTGCAGTATAAATGTCCAACATGCCGGGGGGAATGTTATAAGATGAAGGATCTTGAAGATGCTGTTCAAGAGCTTTGGAGGAGAAAAAATATTGCTGACAAAGATTTAATTGCCAGCTTGAGGGCGGCAGCCGGTTTACCAACtgaagatgaaatattttgtatttcacCATATTCAGATGATGAGGATAGTGGGAACGTAAAAGCTAAGAGTGAATCTGGCCGTTCTTTGAAGTTGTCTCTTAAGAATTTGTCTGATAATTCACCAAAGAAGTTGAAAGATTATGGAAAGAAATCTTCAATCAAAAAGTATGTCAAGAAAAAGGACTATGAGACATCTACAACTGGTAAAACCGATGCACGGCACAGTTTTGAAGGTCATAGTGATATGAAGTCTTTGCATAACTTGGATGATGATAAGAATGATGATGCTCAATCCTACAGGAAAGAAGGGCCTGATGTTTATTCATCACCTGCTGCTGGAAGCCCAAGTCAGACTGATGGACTTGGTCCTGTCAATCAGACAGTGAATTGGAAGCACAAGTTTGTAGATGAGGTGATGGTCAGTGATGAAGAGAGGAGACCTAAAGTTGTTCGaatcaaaaacaataaagCACACACTATGGATAGTGAAGATGAGGCTGGGAAACATGGCGATAAGATTCAGAATGTTAAAGGGAAGAAGTTAGTTATAAATCTGGGGCCACGGAAAATTAATGTGACTAATTCTCCCCGATCTGATACTTCAGGCTGTCAAAGAGATCAAGATCTGGTTACAACTAATGGCAATGAAGATACAAGCCAGTGGAGGAAGGATGACAAGTCTGTGTCAGATAGACAAGATGGCACAGCAAGGCACATTGATGGTAAAGGAAACAGAGTTGACTCTGGTCAATCAAAAGGTTTAAAGGTTTCAGGTAGAGAAAGAAACTTGATAAAGCTCGGAAAAGTTAGGCCAGAAGTTCCTGAATTGATCCAGAACTTTAGTAGAGGCAACACTACTGATGGATGTGAGGCCGTACCTTCAGAGCGACCTCGAATCGTTTTTGGAAGACGTAAAACAGAAGGAACGATTGATCAAGTTAAAGTTGCAGAAGCAAACTTAAGAGGTGATAGGACATCTGTGGGGAAGCATTCAGAAGGAAGGTCTGACACAAACGATGAAACTGATGATAATAGTAATCAGACATCTTCAAATTTTCCGCCAAAAGATTCCAAACCTTTACTGAGACTTAAATTGAAGAAACCTAGCAATGacaatcaaaattctccacatcaTGAGGAGGAGAAGACTACAATCAAGGGTCAGAGGTCAAAACGGAAGAGACCTTCACCTTTTATGGAGAAAGCATCACTTAACGAGGGTGAAAATGTGGGACAATCACATGAAGGAACTCTAATGGATGAGATCATGGACGCAAACTGGATATTGATGAAGTTAGGTAAAGATGCAATTGGAAAGAGAGTTGAAGTTCATCAGACGGTTGATAATTCATGGCACAGAGGATTGGTTACTGACAGCATTGAAGGCACTTCAAAGTTATCTGTTACCTTAGATGATAGGAAGGTGAAGACAGTGGATCTCAGGAAACAAGGGGTCCGTTTTGTTCCTCAAAAGCAGAAGAGATCAAAAGCATG 2612 0.4257 MAFHVACPITCRKICFCSLGFPRTLHTPKGKAEFLDEVAKLEDFLRDPWGIRAHDKDKTVQVVVPKVVPPPPPPRPLQDPVDGSQAGDDEAVSMQAKRVALQKKGAAAMIAAEEYARKFESGDLVDAAGNLTGEEQGQKVFCRMCNRLEIEGSEKAKKMLPCKSCGKKYHRNCLRSWAQHRDLFHWSSWTCRNCRICEACRRHGDPSKFMFCKRCDGAYHCYCLQPPHKNVSSGPYLCPKHTRCHSCGSNVPGNGQSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDMCQRWVHCQCDNISDEKYLQFQVDGNLQYKCPTCRGECYKMKDLEDAVQELWRRKNIADKDLIASLRAAAGLPTEDEIFCISPYSDDEDSGNVKAKSESGRSLKLSLKNLSDNSPKKLKDYGKKSSIKKYVKKKDYETSTTGKTDARHSFEGHSDMKSLHNLDDDKNDDAQSYRKEGPDVYSSPAAGSPSQTDGLGPVNQTVNWKHKFVDEVMVSDEERRPKVVRIKNNKAHTMDSEDEAGKHGDKIQNVKGKKLVINLGPRKINVTNSPRSDTSGCQRDQDLVTTNGNEDTSQWRKDDKSVSDRQDGTARHIDGKGNRVDSGQSKGLKVSGRERNLIKLGKVRPEVPELIQNFSRGNTTDGCEAVPSERPRIVFGRRKTEGTIDQVKVAEANLRGDRTSVGKHSEGRSDTNDETDDNSNQTSSNFPPKDSKPLLRLKLKKPSNDNQNSPHHEEEKTTIKGQRSKRKRPSPFMEKASLNEGENVGQSHEGTLMDEIMDANWILMKLGKDAIGKRVEVHQTVDNSWHRGLVTDSIEGTSKLSVTLDDRKVKTVDLRKQGVRFVPQKQKRSKA 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01265 870 ProSitePatterns Zinc finger PHD-type signature. 142 194 IPR019786 -
Bva07g01265 870 MobiDBLite consensus disorder prediction 432 474 - -
Bva07g01265 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 251 IPR013083 -
Bva07g01265 870 SMART PHD_3 196 242 IPR001965 -
Bva07g01265 870 SMART PHD_3 141 195 IPR001965 -
Bva07g01265 870 SMART PHD_3 279 334 IPR001965 -
Bva07g01265 870 MobiDBLite consensus disorder prediction 685 785 - -
Bva07g01265 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 336 IPR013083 -
Bva07g01265 870 MobiDBLite consensus disorder prediction 561 590 - -
Bva07g01265 870 CDD PHD_SF 141 194 - -
Bva07g01265 870 MobiDBLite consensus disorder prediction 66 89 - -
Bva07g01265 870 MobiDBLite consensus disorder prediction 528 632 - -
Bva07g01265 870 MobiDBLite consensus disorder prediction 483 498 - -
Bva07g01265 870 SUPERFAMILY FYVE/PHD zinc finger 186 247 IPR011011 -
Bva07g01265 870 SUPERFAMILY FYVE/PHD zinc finger 277 338 IPR011011 -
Bva07g01265 870 ProSiteProfiles Zinc finger PHD-type profile. 139 197 IPR019787 -
Bva07g01265 870 MobiDBLite consensus disorder prediction 591 618 - -
Bva07g01265 870 MobiDBLite consensus disorder prediction 528 549 - -
Bva07g01265 870 MobiDBLite consensus disorder prediction 696 714 - -
Bva07g01265 870 PANTHER PHD FINGER FAMILY PROTEIN 2 864 - -
Bva07g01265 870 ProSiteProfiles Zinc finger PHD-type profile. 277 336 IPR019787 -
Bva07g01265 870 SUPERFAMILY FYVE/PHD zinc finger 134 195 IPR011011 -
Bva07g01265 870 MobiDBLite consensus disorder prediction 732 772 - -
Bva07g01265 870 MobiDBLite consensus disorder prediction 432 498 - -
Bva07g01265 870 PANTHER HISTONE ACETYLTRANSFERASE 2 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01265 Bva-Chr7 13483696 13491178 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01265 - - gmx:100815407 1171.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01265 07 13483696 13491178 Bva07g01265 07 13483696 13491178 ECH