Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01242 ATGGCGATGGCAACAGGCTCCATCGCAGTATATGCTTTGAAAGGAGGTGCTGGAAAGCTCCCACTTTTCTCACTATGGAGAACGAAGGCAAATCGCTCTATTGTTTCCAGCGCCACGCGCTCCTCCCTCTTTTCTCATCCCAAGTTCACGTTTTTCTCCATCTCAATGCTTAATCCATCGTCATCAGCAGGggtaagaagaagaaataaaagagggTTTCCCTCATTTTGCACAGCTTCCAGTCCTACAGAAGAGCTTGTTTCCGAAGCTACCTCTAGCTCCAATGGTGCTGACAACGGTGAACCCAGTATTAAGGAATTGGCGGGCTTGCTCGACATAAGGGTTGGGTGCATCCTCAGGGCGTGGAAACACGAGGAAGCTGATTCTCTTTATGTTGAAGAGGTAGATATTGGTGAGCCAGAGCCCAGAATCATATGCAGCGGGCTTGTCAAGTACATCCCTCTGGACCATCTTCAGGGCAAAAAGGTTATTGTTCTTTGTAATTTGAAGCCGAGGAACATGCGTGGAGTCAAGTCCTGTGGAATGCTCATGGCTGCTTCTGATGCAAAGCATGAGAATGTTGaacttctttttcctcctgAGGAAGCCGCCGTTGGTGAAAGAATATGGTTTGGGTCagaagatgaaaaggaaactCAACCTGCTGCTGCCACTCCAAACCAGattcaaaagaaaaagatttgggAAGCAGTGCAGCCACATCTTAAGACGGATGCTTCATCTATTGCCTTGCTTGGGGAGCACGTTATGCGAACATCTTCAGGTGCTGTGGCATGCCAGACACGGAAGAACGCAAATATCTCCTG 827 0.4438 MAMATGSIAVYALKGGAGKLPLFSLWRTKANRSIVSSATRSSLFSHPKFTFFSISMLNPSSSAGVRRRNKRGFPSFCTASSPTEELVSEATSSSNGADNGEPSIKELAGLLDIRVGCILRAWKHEEADSLYVEEVDIGEPEPRIICSGLVKYIPLDHLQGKKVIVLCNLKPRNMRGVKSCGMLMAASDAKHENVELLFPPEEAAVGERIWFGSEDEKETQPAAATPNQIQKKKIWEAVQPHLKTDASSIALLGEHVMRTSSGAVACQTRKNANIS 275
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01242 275 Pfam Putative tRNA binding domain 113 207 IPR002547 GO:0000049
Bva07g01242 275 Gene3D - 108 275 IPR012340 -
Bva07g01242 275 PANTHER TYROSINE--TRNA LIGASE, CYTOPLASMIC 74 275 - -
Bva07g01242 275 PANTHER TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER 74 275 - -
Bva07g01242 275 CDD tRNA_bind_EMAP-II_like 110 210 - -
Bva07g01242 275 SUPERFAMILY Nucleic acid-binding proteins 109 274 IPR012340 -
Bva07g01242 275 ProSiteProfiles tRNA-binding domain profile. 107 210 IPR002547 GO:0000049
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva07g01242 Bva-Chr7 13350746 13354369 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01242 - - gmx:100810696 338.961