Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01003 ATGATGCAACCAAGAACAAGGACACAACCTCCAGTTCGTGCTGTATATGAGGATTTCCCAGTCAAAGCAGAAATGACAGAAAACCCAGAAGCTCACGTTCTGCTTGTTTACCTTCCCGGATTCATAAAGGAGCGAGTAAGGATCACATACGTGAACTCATCCAAAACTGTAAGGGTTACTGGAGAGAAACCAATTGGGGGCAACAAATGGAGCCGTTTCAACAAAGAATTTCCTGTTCTGGAAGATTGCGAGGTGGAGAAATTGCAAGGCAAGTTTGATAAGGGAATTCTCACCATCACAATGCCAAAGAAGATTCCTCCACAGGATGCACAAAAAAGTCCAAGCCCTTCAAAGGAACTTGTGCCTGAAGCAAGAAAGCCTGAGAAGGCACAGGAGATGTTGCCTCCGAAGTCTGCAACTGATAATAAAGTGGAAGAACCAGCAGATAAGAAAAGTGTTGATCAACTCTCAGCTCTACTAAATGGCACTACTAATAAGCAAAGACCTATATCTGATATTGATCAGCAAAAAGCGACAGAAGAGAAGGGATTGAGAGCTTTGATTCCTCTAGAACCCAAGAGAGAGTCTAAGCCTCAGAAGGGTAAAGAGGAAACTGAGCAAAAGCCCACATTAATGGCAGATGCAAGAAAGCAAATAGATGGTAGAAAAAATGGTCAAGAGCAAATTGAGCCAAAGCCCACATTAGTGGATTCTACTAGAAAGGTAacaggtgaacagcctctaaAGGgcacagaaaaagaaagaaaggaaaaatattatgagTACCCAGCCAAGGTAGCAGGACCTTATTCCCCTCCAAAAAGTtcagagaaggaaaaggaaacaacCGGCAAAGCTGCCAACGATGAGGGGAAGCAAGAAGAGGATATGCTTGACTCAGTGGGGAAGGGAATCAAAGATGTGTCTGCTGCTGCAACCATGGCTGTCACAAAAATAACAGAAGGGACATTaaaggatgaagaaaagaatttgcTTGTGAATATGGGAGCTGCAGTAATGGTAATTGCAGCTCTGGGAGTTTATGTTTCCTATAAGTTTGTATCCTCAGGAAAATCCTG 1079 0.3967 MMQPRTRTQPPVRAVYEDFPVKAEMTENPEAHVLLVYLPGFIKERVRITYVNSSKTVRVTGEKPIGGNKWSRFNKEFPVLEDCEVEKLQGKFDKGILTITMPKKIPPQDAQKSPSPSKELVPEARKPEKAQEMLPPKSATDNKVEEPADKKSVDQLSALLNGTTNKQRPISDIDQQKATEEKGLRALIPLEPKRESKPQKGKEETEQKPTLMADARKQIDGRKNGQEQIEPKPTLVDSTRKVTGEQPLKGTEKERKEKYYEYPAKVAGPYSPPKSSEKEKETTGKAANDEGKQEEDMLDSVGKGIKDVSAAATMAVTKITEGTLKDEEKNLLVNMGAAVMVIAALGVYVSYKFVSSGKS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01003 359 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 12 118 IPR002068 -
Bva07g01003 359 MobiDBLite consensus disorder prediction 156 172 - -
Bva07g01003 359 MobiDBLite consensus disorder prediction 274 298 - -
Bva07g01003 359 MobiDBLite consensus disorder prediction 246 262 - -
Bva07g01003 359 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 263 358 - -
Bva07g01003 359 MobiDBLite consensus disorder prediction 173 227 - -
Bva07g01003 359 PANTHER HEAT SHOCK PROTEIN 26 263 358 IPR045045 -
Bva07g01003 359 CDD ACD_sHsps-like 24 103 - -
Bva07g01003 359 Gene3D - 4 105 IPR008978 -
Bva07g01003 359 PANTHER HEAT SHOCK PROTEIN 26 3 250 IPR045045 -
Bva07g01003 359 MobiDBLite consensus disorder prediction 102 298 - -
Bva07g01003 359 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 3 250 - -
Bva07g01003 359 Pfam Hsp20/alpha crystallin family 25 110 IPR002068 -
Bva07g01003 359 SUPERFAMILY HSP20-like chaperones 10 109 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01003 Bva-Chr7 11806388 11807977 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01003 - - lang:109338287 228.794