Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00841 ATGGGTTTTAGGCAGatgttgatattttttgttacagTGGTGGCGGTCACCGGAAGAAGTACGGCGGAGCATAATTATGGGGAAGCATTAACAAAGAGCATCTTGTTCTTTGAAGGGCAGAGGTCAGGGAAGTTACCAGCAACACAGAGAATGAAATGGAGGAAGGATTCTGCTCTTGGTGATGGTTTTCAAGCTAAACATATTTCCTTCGTGACTCCTCTGCAGAAAGTTGATTTGGTAGGTGGGTACTACGATGCCGGCGACAATGTCAAATTCAATTTCCCTATGGCATTTACAACAACCATGCTGGCATGGAGTGTAATAGAGTTTGGAAAATTCATGGGACCAGACCTAAAATATGCTCTAGATGCTGTTCGTTGGGGAACAGATTACTTTCTTAAGGCCACAAGCATTCCTGGGCATGTGTTTGCACAAGTTGGTGAGCCTCACAGAGATCACAATTGCTGGGAAAGACCCGAAGACATGGACACACCCAGGACTGCTTATGCTGTCAGCAAACAGTTCCCTGGTTCTGAAGTTTCAGCTGAGATAGCAGCAGCACTTGGAGCCTCTTCCATTGTGTATAGAAAATATCATCTTGGTTATGCTCGAAAGCTTCTCAACAGAGCTAGAAAGGTGTTTGACTTTGCTGATAGGTACCGAGGATCATATAATGACAAACTTGGAAAATGGGTGTGTCCTTTTTATTGTGATTATAGTGGGTACAAGGATGAATTGGTCTGGGGAGCAGCATGGTTGTTCAGAGCCACAAAGGAGCCTTATTACTGGAACTATGCTGACAAATATATTCACAACTTGAGCAACTTTGGTGAATTTGGATGGGACACAAAGGATGCTGGGATTAATGTACTCATTTCTAAGCTTCTGATAAATAGCACCTCTTCTAAGCCTTTCATCCCCAATGCGGACAACTTTTTCTGTTCTGTGCTACCTGAATCACCTTCGGTATCAGTCTCATACTCTCCagGTGGTCTCTTTTTCAAGCCTGGAGGGAGTAATTTGCAGCATGCAACagctttctcatttctttttctggtttaTGCTGgctttttgaaaaatgcaaATAGAAAGATTGACTGTGGAAATGGCGTTATTGCTTCTCCTGAAAGACTTAAAGAATTTGCGAGAGGGCAGATAGATTACATACTAGGAAGCAACCCATTGAACATGTCCTACATGGTAGGATATGGACAAAAATTTCCTCAAAGAATACATCACCGTGCATCATCGTTGCCTTCCATAGATCAACACCTTGGCCACATCGACTGTAAAGGAGGATCCTCTTATTTTGATAGcccaaaccctaaccctaactTGCTTATCGGTGCTGTTGTTGGGGGACCAGATATCAAAGATTCATATACTGATTCTCGAGCTGATTTTGTGCACTCAGAGCCTACCACTTACATCAATGCACCTCTTGTAGGTGTTCTTGCTTACTTCAAAtctaataaatctta 1481 0.4045 MGFRQMLIFFVTVVAVTGRSTAEHNYGEALTKSILFFEGQRSGKLPATQRMKWRKDSALGDGFQAKHISFVTPLQKVDLVGGYYDAGDNVKFNFPMAFTTTMLAWSVIEFGKFMGPDLKYALDAVRWGTDYFLKATSIPGHVFAQVGEPHRDHNCWERPEDMDTPRTAYAVSKQFPGSEVSAEIAAALGASSIVYRKYHLGYARKLLNRARKVFDFADRYRGSYNDKLGKWVCPFYCDYSGYKDELVWGAAWLFRATKEPYYWNYADKYIHNLSNFGEFGWDTKDAGINVLISKLLINSTSSKPFIPNADNFFCSVLPESPSVSVSYSPGGLFFKPGGSNLQHATAFSFLFLVYAGFLKNANRKIDCGNGVIASPERLKEFARGQIDYILGSNPLNMSYMVGYGQKFPQRIHHRASSLPSIDQHLGHIDCKGGSSYFDSPNPNPNLLIGAVVGGPDIKDSYTDSRADFVHSEPTTYINAPLVGVLAYFKSNKS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00841 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
Bva07g00841 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Bva07g00841 493 PANTHER ENDO-1,4-BETA-GLUCANASE 8 491 - -
Bva07g00841 493 SUPERFAMILY Six-hairpin glycosidases 23 489 IPR008928 GO:0005975
Bva07g00841 493 Coils Coil 491 493 - -
Bva07g00841 493 Pfam Glycosyl hydrolase family 9 26 485 IPR001701 GO:0004553|GO:0005975
Bva07g00841 493 Gene3D - 20 493 IPR012341 GO:0005975
Bva07g00841 493 PANTHER ENDOGLUCANASE 8 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00841 Bva-Chr7 10408141 10412578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00841 4 493 Glycoside Hydrolase AT1G70710 57.715 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00841 K01179 - gmx:100775752 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00841 07 10408141 10412578 Bva07g00841 07 10408141 10412578 ECH