Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00621 ATGACTACCATGAGCACAATCATCAATGCTTGGGTTCTTCTTGTTGGTGCAGTCAGTGTTGTTAAAGCTCAAGATCTCATACCAGGATTTGTGCAAACAAGTGGCACTGAATTTGTGTTGAACGGTTCCCCATTTCTATTCAATGGCTTCAACTCTTACTGGCTGATGGTTGTTGCATCTGATCCAACCCAGAGATACAAAGTTTCTGGGGTTTTTCATGAAGCTGCATCTGCTGGTCTTAGCGTTTGTCGCACTTGGGCATTCAGTGATGGCGGTTATCAAGCTCTTCAAAAATCTCCAGGAGTCTACGATGAGCTTCTCTTCCAGGCActtgattttgttatttctgAGGCAAGAAAGTATCGTATCAAACTGATTTTAAGTTTGGTAAACAATTACAATGACTTTGGAGGAAAGCATCAATATGTAGAGTGGGCTATAAGTGCAGGCGTTCCAGTTACTAGTGATGATGACTTTTACACTAATGGTGTCATTAAAGGCTACTACAAGAACAATGCCAAGGCAATAATCACAAGGATTAATAGCATTACTAGAATAGCATACAAAGAAGATCCCACAATAATGGCATGGGAGCTAATGAATGAACCTCGTTGTCAAGTTGACGTTAGTGGCAAAACCTTGAACGGATGGATTCAAGAGATGGCAAGTTATCTTAAATCCATAGATAACAAACACTTGTTGGCAGTTGGCATGGAAGGCTTTTATGGAGATTCAACGCCAAAGAAAGTGCAATACAACCCTGGCTCTGTCAAATATGGAACAGATTTTATCACAAATAATCTGATTAAAGAGATTGACTACACAACAATACATGCATATGCTGATATTTGGTTAAAAGGGGAGGGTGACAAGACAAAAGAGATATTCATGGAAAGATGGTTCATAAATCACTGGAATGATTCAAGGACTGTTTTAAAGAAGCCATTAGTTTTCGGTGAATTCGGAAAATCGAAGAAGGATCCTGGATACACAACACAATCAAGGGATTCGTTCATGAACACCACTTATTCATTTATCTACAACTTTGCAAAGAATGGAGCAACAATTGCTGGAGGCCTGGTTTGGCAAGTTATGAGTGATGGGATGGAGTCTTATTATGATGGCTATGAGATTGTTTTGACACAAGACACTTCAACAAGAAATATCATGTCTGTGCAAGCCCTTAAAATGGCATCTCTAGCTCATTA 1208 0.3899 MTTMSTIINAWVLLVGAVSVVKAQDLIPGFVQTSGTEFVLNGSPFLFNGFNSYWLMVVASDPTQRYKVSGVFHEAASAGLSVCRTWAFSDGGYQALQKSPGVYDELLFQALDFVISEARKYRIKLILSLVNNYNDFGGKHQYVEWAISAGVPVTSDDDFYTNGVIKGYYKNNAKAIITRINSITRIAYKEDPTIMAWELMNEPRCQVDVSGKTLNGWIQEMASYLKSIDNKHLLAVGMEGFYGDSTPKKVQYNPGSVKYGTDFITNNLIKEIDYTTIHAYADIWLKGEGDKTKEIFMERWFINHWNDSRTVLKKPLVFGEFGKSKKDPGYTTQSRDSFMNTTYSFIYNFAKNGATIAGGLVWQVMSDGMESYYDGYEIVLTQDTSTRNIMSVQALKMASLAH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00621 402 Pfam Cellulase (glycosyl hydrolase family 5) 41 340 IPR001547 GO:0004553|GO:0071704
Bva07g00621 402 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 5 402 - -
Bva07g00621 402 PANTHER - 5 402 IPR045053 GO:0004553
Bva07g00621 402 Gene3D Glycosidases 28 401 - -
Bva07g00621 402 SUPERFAMILY (Trans)glycosidases 30 386 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00621 Bva-Chr7 8029774 8033362 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00621 25 397 Glycoside Hydrolase AT5G66460 52.800 1.82e-149 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00621 K19355 - gmx:100778515 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00621 07 8029774 8033362 Bva07g00621 07 8029774 8033362 ECH