Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00434 ATGGAAGATATAGAAGATTTGCTAATTGGGAGCGGAAGCGGATCCCCACCTGGGTTTCGGTTGCCATTAACCTCCacaatatttataaagaattttgggTGCTCTTATAATCAGAGTGATAGTGAATACATGGATGGTCAGCTTTCAGCTTTTGGTTATACACTTAGTGACAATCCTGATGAAGCAGACCTATGGCTGATTAATACGTGCACAGTTAAATCCCCGAGTCAATCTTCCATGGATACCATAAtatcaaaagggaaaaatttaaataaaccaTTAGTGGTTGCAGGGTGTGTCCCTCAAGGAAGTCGGGACTTGAAAGAGCTAGAAGGAATCAGCCTTGATGCTCTTGATCTTCCGAAGGTGAGAAAGAACAAGTTTGTTGAGATTCTTCCTATTAATGTTGGTTGTTTAGGTGCTTGCACTTACTGCAAGACAAAGCATGCTCGTGGTCACCTAGGTAGTTACACAATTGATAGTCTTGTAGGCCGTGTAAGATCTGTCATAGCTGATGGAGTTAAAGAGACATGGCTGAGCAGTGAAGATACTGGAGCATATGATAATTTCTA 572 0.3899 MEDIEDLLIGSGSGSPPGFRLPLTSTIFIKNFGCSYNQSDSEYMDGQLSAFGYTLSDNPDEADLWLINTCTVKSPSQSSMDTIISKGKNLNKPLVVAGCVPQGSRDLKELEGISLDALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVRSVIADGVKETWLSSEDTGAYDNF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00434 190 SFLD Radical SAM 136 189 IPR007197 GO:0003824|GO:0051536
Bva07g00434 190 PANTHER RADICAL SAM PROTEINS 116 187 - -
Bva07g00434 190 PANTHER RADICAL SAM PROTEINS 1 114 - -
Bva07g00434 190 SUPERFAMILY Radical SAM enzymes 106 188 - -
Bva07g00434 190 Gene3D - 132 189 - -
Bva07g00434 190 ProSiteProfiles Methylthiotransferase N-terminal domain profile. 25 137 IPR013848 GO:0035596|GO:0051539
Bva07g00434 190 Pfam Uncharacterized protein family UPF0004 27 105 IPR013848 GO:0035596|GO:0051539
Bva07g00434 190 Gene3D - 26 131 IPR038135 -
Bva07g00434 190 ProSitePatterns Methylthiotransferase radical SAM domain signature. 132 152 IPR020612 GO:0051539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00434 Bva-Chr7 6056270 6061957 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00434 K15865 - mnt:21408161 310.842