Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00408 ATGGCGACCTCTGTCCGATCTGACGACGTTTCTGTAGACCCCGAAATAGAAACGCCGTTCGTACTGGATACCGTTGATGCGCCGTTGACTACAAAGGCCGGCCAGTCATCCGATCCAAGTGTGGAAGTAGCAGAAAGATTTGCTTATGGTGGAATTGAATCCAACCTGATAACTTATCTCACGAGGCCACTTCAGCAGTCTACGGCTACGGCGGCGGCGAATGTGAACATCTGGGACGGAACGGCATCGTTGCTTCCTCTACTTGGTGGTTTTGTTGCTGACTCTTATCTTGGACGCTATCGCACTATTCTTGTAGCTTCTCTCATCTATATTTTGGGACTCGGTTTGTTAACGATTTCAGCTATGCTTCCTTCTCTTAGCAATTCTGAGTGCCGAGTTACTGATGAATTTACATCATGTTCTTCTCAATTTCAAGtaattcttctcttcttctcacTTTACCTGGTGGCCATTGGGCAAGGAGGACATAAACCTTGTGTTCAGGCATTTGGAGTAGATCAATTTGATGAGCGTCATCCAAAGGAATGCAAAGCTAGAAGCTCATTTTTCAATTGGTGGTATTTTACAATGTGTGCAGGAATGTTGGCAACTGTTTGGATCCTGAATTATATACAAGACAACCTTAGTTGGGTTCTTGGATTTGGAATTCCCTGTCTTGCAATGATCATTGCATTGATTGTTTTCTTACTAGGAACAAAGACATATAGGTTTAACATTGAGGCAGATGAGAAGAGCCCTTTTGTGAGAATTGGCCGTGTATTTGTTGCAGCTATACAAAATCGGCGAACTTCCCTCTCAGATATAGCTGAAAAAGAGGAAAGTTGTGGAATCCTAACAAGTCAAAGTTCAGAAGAATTCAAGTTCCTCAACAGGGCACTCTTTACACCAAAGGGTTCCAAAGAAGAGGAGACTTGTAGCCTCAGTGAAGTGGAAGAAGCAAAGGCTGTGCTTAGGCTTGTTCCCATTTGGGCTACATGTTTGATCTTTGCTATTCTTTGTGCTCAGTGTCAACCTTTTTCACCAAGCAAGGGGTTACTCTGGAAAGAACCATCTTTTCAGGCTTTGACATACCTCCTGCATCTCTTCAAACGCTTCAGACTTTGGGTATTGTTCTCTTCAGTGCCATCTATGACCGTGTATTTGTACCAATTGCAAGAACTATCACTAAGAACCATCTGGCATCACAATGCTGTTACGAATTGGAACCGGGATCTCAGTATCTGTAATCACTATAGTAATTGCAGCTTTTGTTG 1274 0.4254 MATSVRSDDVSVDPEIETPFVLDTVDAPLTTKAGQSSDPSVEVAERFAYGGIESNLITYLTRPLQQSTATAAANVNIWDGTASLLPLLGGFVADSYLGRYRTILVASLIYILGLGLLTISAMLPSLSNSECRVTDEFTSCSSQFQVILLFFSLYLVAIGQGGHKPCVQAFGVDQFDERHPKECKARSSFFNWWYFTMCAGMLATVWILNYIQDNLSWVLGFGIPCLAMIIALIVFLLGTKTYRFNIEADEKSPFVRIGRVFVAAIQNRRTSLSDIAEKEESCGILTSQSSEEFKFLNRALFTPKGSKEEETCSLSEVEEAKAVLRLVPIWATCLIFAILCAQCQPFSPSKGLLWKEPSFQALTYLLHLFKRFRLWVLFSSVPSMTVYLYQLQELSLRTIWHHNAVTNWNRDLSICNHYSNCSFC 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00408 424 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 40 351 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva07g00408 424 Pfam POT family 100 344 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva07g00408 424 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 89 113 IPR018456 GO:0006857|GO:0016020|GO:0022857
Bva07g00408 424 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 40 351 - -
Bva07g00408 424 SUPERFAMILY MFS general substrate transporter 52 250 IPR036259 -
Bva07g00408 424 Gene3D MFS general substrate transporter like domains 26 392 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00408 Bva-Chr7 5811360 5816585 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00408 15 351 Organic Solute Cotransporters AT1G22540 60.870 2.71e-129 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00408 K14638 - gmx:100776720 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00408 07 5811360 5816585 Bva07g00408 07 5811360 5816585 ECH