Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00266 ATGTTTACTCTATTCAATAGAAGTGTATCAAAGTTCCGTAACGAATTGAAATCGAAATGGGTTCTTCTGAAAATCCGTTCTTTCGGCACTTATGCAGCAACCCCACAAACTGGGACAACCACAATCAGTACGGGTCTCTATGGCTTCCCCCATTTGAAGACTCCAAAAGGCTTTCAAAAATTCGTCGATGAAGCTATTGAAAGGTCTGGAGAACTAATTACATACATTTCTACGATGCCACCTGCTGCGGAAATAATCCGAGCAATGGATGAGATTTCTGACACAGTCTGTTCTGTTGTTGACTCTGCTGAACTTTGTAGGCATACCCATCCAGACAGGGAATTTGTTGAGGAGGCCGACAAGGTGTCACTAAGAATTAATGAATATCTACATCATCTCAACACAAACCATGTTCTCTATGATGCGGTGAAGAAAGCTGAGCAAGAGGGTCATATGCTCTCTGAGGAAGCACAAATGGCAGCTAGAAACTTACGTATTGACTTTGAAAGGGGTGGAATTCATCTTTGCACTGAGAAATTGGACAGAGTAAATCTGCTAAATGTTGAAATTTCTAAGCTATGCAGAGAgttcaatgaaaatattgcaAGGGACCCAGgatttgttgatatatatcCTTCATCACGTATCCCCAAAAGTTTGCATTATCTTGTTAAGCCTGTCTATCggtcaacatatttaaaatcaaaggaTTTAGCAGGGTGCAGGGACACCACAACAGAGAAAGGTTTTCGGATTAGGACAGACTCACAAACTCTTGCTTCTGTTCTGCAATTGTCATCAGACGGTGAGGTTAGAAAAATGGCATATATTCAAGGATATTCCGTCCCAAATGCAAATGTTTGTGTTCTCCGAAGGCTTATATCTTCTCGCCACAAGCTGGCTCAGATAATGGGGTGTAGGTCTTATGCTGAATTTGCTATGAAGCCTAATATGGCTTCATCACCAGCGGTTGTAATGTCATTTTTACATGAAATGAGCAACATGGTCCGGGCAAAGGCTGATGAGGAGTTTAAAGCAATTAGGAaatttaagagagaaaaatgtgGTGAAAGTTGTGGAGATCTAAGGCCATGGGATGAGGCGTACTACACAACAATGATGAAGTCCTCTGCTTATAATTTGGACCCATCAGTTGTAGCatcatattttcctttatcaCAGTGTATTGAGGGTTTGAAGGTGCTGGTGCAGTCTTTGTTTGGTGCAACTTTCTGTAGCATCCCAATGGCACCAGGTGAATCATGGCATCCGCAAGTGCTTAAATTGTCTCTTCATCATCCTGAAGAGGGTGACTTGGGATATCTGTACCTTGATTTGTACTCAAGGAAGGGAAAATATCCTGGTTGTGCTCATTTTGCGATTAAAGGGGGTCGCAGGATTTCTGAAACAGAATACCAACTTCCAGTTGTTGCTcttgtttgtaattttttagcTGCTGGATCACATAATCCATCTGGTGTAAAGCTTAATCATGCTGACCTAGAAACACTTTTTCATGAGTTTGGACATGCCCTTCATTCACTGCTCTCAAGAACGGACTACCAACATTTTTCAGGCACCAGAGTGGTTCTTGATTTTGCAGAAATACCATCAAACCTCTTTGAATACTATGCATGGGATTATCGATTCCTGAAAACATTTGCTAGACACTATTCCACTGGGGAAGAAATCCCTCAGAAGCTGGTGGAGTCAATGCAGGGTGCTAGAAATATGTTCGCTGCTACTGATTTGCAACGCCAGATCTTCTATGCCTTAATTGACCAGACATTTTTCGGGGAGCATTCATTCCCATTAGAAGACACAAGTTGTATTGTTGCGAAGCTAAAAAGAGAACACACTTGTTGGGAACACGTGGAAGGCACCCATTGGGAGACGCGATTCAGTCACCTCCTCAATTATGGTGCAGGATACTATAGCTACTTGTATGCCAAATGTTTTGCTGCTACCATATGGAAGAATTTGTGCCAGGAGGATCCGCTGTCGCTAAGCGCCGGAACCGCCCTAAGAACAAAGTTCTTACAGCATGGAGGAGCCAGAGAACCGGCTGTTTTGTTGAATGATCTAGTTGGAGATGGTATCCTTAGGCATTGTAATGGAGGGATAATTCCTGATGCTACAAGTCTATGTTATGAAATGAAACTTTA 2165 0.4055 MFTLFNRSVSKFRNELKSKWVLLKIRSFGTYAATPQTGTTTISTGLYGFPHLKTPKGFQKFVDEAIERSGELITYISTMPPAAEIIRAMDEISDTVCSVVDSAELCRHTHPDREFVEEADKVSLRINEYLHHLNTNHVLYDAVKKAEQEGHMLSEEAQMAARNLRIDFERGGIHLCTEKLDRVNLLNVEISKLCREFNENIARDPGFVDIYPSSRIPKSLHYLVKPVYRSTYLKSKDLAGCRDTTTEKGFRIRTDSQTLASVLQLSSDGEVRKMAYIQGYSVPNANVCVLRRLISSRHKLAQIMGCRSYAEFAMKPNMASSPAVVMSFLHEMSNMVRAKADEEFKAIRKFKREKCGESCGDLRPWDEAYYTTMMKSSAYNLDPSVVASYFPLSQCIEGLKVLVQSLFGATFCSIPMAPGESWHPQVLKLSLHHPEEGDLGYLYLDLYSRKGKYPGCAHFAIKGGRRISETEYQLPVVALVCNFLAAGSHNPSGVKLNHADLETLFHEFGHALHSLLSRTDYQHFSGTRVVLDFAEIPSNLFEYYAWDYRFLKTFARHYSTGEEIPQKLVESMQGARNMFAATDLQRQIFYALIDQTFFGEHSFPLEDTSCIVAKLKREHTCWEHVEGTHWETRFSHLLNYGAGYYSYLYAKCFAATIWKNLCQEDPLSLSAGTALRTKFLQHGGAREPAVLLNDLVGDGILRHCNGGIIPDATSLCYEMKL 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00266 721 Gene3D Collagenase (Catalytic Domain) 391 544 IPR024079 GO:0008237
Bva07g00266 721 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 20 720 IPR045090 GO:0004222|GO:0006508
Bva07g00266 721 Pfam Peptidase family M3 263 698 IPR001567 GO:0004222|GO:0006508
Bva07g00266 721 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 54 697 - -
Bva07g00266 721 CDD M3A_MIP 45 703 - -
Bva07g00266 721 Gene3D Neurolysin, domain 3 180 697 IPR024077 -
Bva07g00266 721 PANTHER MITOCHONDRIAL INTERMEDIATE PEPTIDASE, MITOCHONDRIAL 20 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00266 Bva-Chr7 3878134 3887037 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00266 K01410 - gmx:100794972 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00266 07 3878134 3887037 Bva07g00266 07 3878134 3887037 ECH