Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g00152 ATGAGAGCATCTTCTTTGTCTTTCCTCTTCGTTTTGGCCACTTTTGTTCTTGTGGACAATGTGCAATGCGACCAAAATTATAGAGAAGCTTTGGCCAAATCGTTGTTGTTTTTCCAAGGCCAGAGGTCAGGGAGAGTGCCGCCAAACCAGCAAATCACTTGGAGGTCTAACTCTGGCCTTTTAGATGGTCGCCAAGCTAATGTGGATTTAACCGGAGGCTACTATGACGCCGGCGACAAcgtcaaattcaattttccgATGGCCTTCACGGCGACCATGTTATCGTGGGGCACACTCGAATACGGCAAGCGCTTGGGAACTGAAATAACAGAAGCAAGAGCAGCAATCCGCTGGGCTACGGACTATCTCCTCAAATGTGCAACCTCTACACCTGGCAAGGTCTACGTTGGTGTTGGAGACCCGAATGTGGACCACAAATGCTGGGAACGACCCGAGGATATGGATACGGTTCGGACCGTTTATTCAGTATCAGCCAACAGCCCGGGTTCGGATGTGGCGGGTGAGACCGCTGCTGCTCTTGCTGCTGCCTCTATTGTTTTCCAGACAGTTGATCCAACATACTCAACAATGCTGTTGAGAACAGCCAAAAGTGTGTTTCAATTTGCTTTGCAATATCAAGGTTCCTATAGTGACTCACTTGGATCCGCAGTTTGCCCATTTTACTGCTCATATTCTGGTTACaagGATGAGCTATTGTGGGGAGCTGCATGGCTTTTCAGAGCAACAAATGATGTTTACtactataatttattgaaGTCTTTGGGAGCTGATGATCAACCTGATTTATTTAGCTGGGACAACAAATATGCTGGTGCACATGTCCTACTCTCAAGgAGAGCACTCTTGAGCAATGACAAGAACTTTGATCAATACAAGCAAGAAGCTGAGAATTTTATGTGCAAGATCTTGCCCAACTCTCCCTCTTCAAGTACCCAATATACACAAGGGGGATTGATGTTCAAGCTACCAGATAGCAACCTCCAATATGTAACTGCTATAACATTCTTGCTTACAACCTATTCCAAGTACATGGCAGCTACAAAACACACATTCAACTGTGGCAATGTCCTTGTTACTCCAAATTCCTTGAAAGCCCTTGCAAAGAGACAGGTAGACTACATATTAGGAGAGAACCCATTGAAGATGTCCTATATGGTAGGCTATGGTCCAAATTTTCCAAAGAGAATTCACCACAGAGGATCCTCCCTACCCTCACTTTCAGTACACCCAGAAACCATAGGTTGTGATGGAGGATTTCAGCCATTCTACTATTCACAAAACCCCAACCCTAATATTTTGGTTGGAGCCATTGTTGGAGGTCCAAATCAGAACGATGGATTCCCCGATGATCGAAGTGATTACAGTCACTCTGAACCTACAACTTACATCAATGCTGCCATTGTTGGACCTCTAGCATATCTTGCCGGTGTTAATTA 1457 0.442 MRASSLSFLFVLATFVLVDNVQCDQNYREALAKSLLFFQGQRSGRVPPNQQITWRSNSGLLDGRQANVDLTGGYYDAGDNVKFNFPMAFTATMLSWGTLEYGKRLGTEITEARAAIRWATDYLLKCATSTPGKVYVGVGDPNVDHKCWERPEDMDTVRTVYSVSANSPGSDVAGETAAALAAASIVFQTVDPTYSTMLLRTAKSVFQFALQYQGSYSDSLGSAVCPFYCSYSGYKDELLWGAAWLFRATNDVYYYNLLKSLGADDQPDLFSWDNKYAGAHVLLSRRALLSNDKNFDQYKQEAENFMCKILPNSPSSSTQYTQGGLMFKLPDSNLQYVTAITFLLTTYSKYMAATKHTFNCGNVLVTPNSLKALAKRQVDYILGENPLKMSYMVGYGPNFPKRIHHRGSSLPSLSVHPETIGCDGGFQPFYYSQNPNPNILVGAIVGGPNQNDGFPDDRSDYSHSEPTTYINAAIVGPLAYLAGVN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g00152 485 PANTHER ENDO-1,4-BETA-GLUCANASE 10 483 - -
Bva07g00152 485 SUPERFAMILY Six-hairpin glycosidases 24 483 IPR008928 GO:0005975
Bva07g00152 485 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 380 406 IPR018221 -
Bva07g00152 485 Pfam Glycosyl hydrolase family 9 27 476 IPR001701 GO:0004553|GO:0005975
Bva07g00152 485 Gene3D - 22 485 IPR012341 GO:0005975
Bva07g00152 485 PANTHER ENDOGLUCANASE 9 10 483 - -
Bva07g00152 485 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 454 472 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g00152 Bva-Chr7 2656631 2660258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g00152 4 483 Glycoside Hydrolase AT1G71380 74.792 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g00152 K01179 - gmx:100788283 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g00152 07 2656631 2660258 Bva07g00152 07 2656631 2660258 ECH