Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03058 ATGGCCTCGCGCTTCATCGCTGCGATTCTTCTGCTTGTTCTGTTTCTCTCACTCACTTCCCCTTTAGCTGTGTATACCCCAAAGGATAATAATACCTATGGAAAAGAGATTCTAAGCGAAGCCCAGAAAGATAAAGATTGGTTAGTTTCAGTTAGAAGGCAAATACACGAGAACCCAGAATTGGCTTTCCAAGAACACAAAACCAGTGCACTTATCCGCAGAGAACTTGACAAACTTGGCATTCCTTACACATACCCAGTTGCCAAAACCGGCATCGTTGCCCAAATTGGCTCTGGTTCTCCCCCCATCTTTGCTCTTCGGGCTGACATGGATGCCCTCCCCTTGCAGGAGCTTGTTGAGTGGGAACACAAGAGCAAAATTGAAGGCAAAATGCATGGCTGTGGACACGATGTTCACACCACGATGCTGCTTGGTGCTGCGAAATTGCTGAATCAACGGAAAGATAAGCTTCAGGGTACTGTGAAACTTCTTTTCCAACCTGGTGAGGAGGGAGCTGGTGGTGCCTctgaaatgataaaagaaggaGCTCTACAAGGCGCTGAAGCAATATTTGGCATGCATGTCGATTTTAAAAATCCCACAGGAACCATAGCGTCGGCTGCAGGGCCTGTCGCTGCTGCTGGATGCATATTTCAGGTAAAAATAGCAGGACAAGGAGGGCATGCTGCAATGCCACACATACATGTTGATCCAGTACTGGCTGCATCATTTGCAATATTGGCTATTCAACAACTCGTCTCAAGAGAAACTGATCCCCTCCATAGTCAAGTAGTATCAGTTACTTATATCAAAGGTGGGACTGCattaaatttgattccttCTTACGTTGAATTCGGGGGCACCATAAGAAGTCAGACAACTGAAGGTTTGTACCATCTCATGCAGCGATTCAAGGAGGTTATTAAAGAACAAGCAGCTGTGCTCAGATGCAAAGCATATGTTGATATGAAAGAAGAAGAGCACAAACCATATCCAGCTGTGGTGAATGACAAGAACTTGCACCTGCATGTGGAAAGGGTTGGCCAACTTGTGCTTGGTCCTGAGAATGTGAAGGAGTTCGAGAAGGTTATGGCAGGCGAAGATTTTGCATTTTATCAACAACTGGTTCCCGGAGTGATGCTTCATATTGgaataagaaatgagaaagtGGGAGCAATTCACTCTCCGCACtccccatttttctttgttgatgaGCAAGTCCTTCCAATAGGGGCAGCGATACACACTTCTATTGCTGAATTGTATTTACTAGACAAGCATAAGCTCCAAGACTCTTATGTTCAATA 1307 0.4323 MASRFIAAILLLVLFLSLTSPLAVYTPKDNNTYGKEILSEAQKDKDWLVSVRRQIHENPELAFQEHKTSALIRRELDKLGIPYTYPVAKTGIVAQIGSGSPPIFALRADMDALPLQELVEWEHKSKIEGKMHGCGHDVHTTMLLGAAKLLNQRKDKLQGTVKLLFQPGEEGAGGASEMIKEGALQGAEAIFGMHVDFKNPTGTIASAAGPVAAAGCIFQVKIAGQGGHAAMPHIHVDPVLAASFAILAIQQLVSRETDPLHSQVVSVTYIKGGTALNLIPSYVEFGGTIRSQTTEGLYHLMQRFKEVIKEQAAVLRCKAYVDMKEEEHKPYPAVVNDKNLHLHVERVGQLVLGPENVKEFEKVMAGEDFAFYQQLVPGVMLHIGIRNEKVGAIHSPHSPFFFVDEQVLPIGAAIHTSIAELYLLDKHKLQDSYVQ 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03058 435 TIGRFAM amidohydrolases: amidohydrolase 48 411 IPR017439 GO:0016787
Bva06g03058 435 SUPERFAMILY Zn-dependent exopeptidases 36 425 - -
Bva06g03058 435 Pfam Peptidase dimerisation domain 218 312 IPR011650 -
Bva06g03058 435 Gene3D Zn peptidases 49 408 - -
Bva06g03058 435 CDD M20_IAA_Hyd 48 423 IPR044757 GO:0009850|GO:0016787
Bva06g03058 435 PANTHER PEPTIDASE M20 FAMILY MEMBER 7 430 IPR017439 GO:0016787
Bva06g03058 435 PIRSF Amidohydrol_AmhX 33 427 IPR017439 GO:0016787
Bva06g03058 435 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 3 7 430 - -
Bva06g03058 435 Gene3D - 213 331 - -
Bva06g03058 435 SUPERFAMILY Bacterial exopeptidase dimerisation domain 213 331 IPR036264 -
Bva06g03058 435 Pfam Peptidase family M20/M25/M40 105 419 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03058 Bva-Chr6 18931896 18934909 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03058 K14664 - gmx:100777587 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g03058 06 18931896 18934909 Bva06g03058 06 18931896 18934909 ECH