Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03049 ATGGACAATTCTACCCAAGAATCCTTCCTCAGATCCGAAAATTCTGTAACCTATGAGTCCCCTTACCCTCTGTACGCCATGGCCATCTCTTCCAACCCTTCCATTACCTCTCACGGCCAGCGTATCGCAGTTGGTAGCTTTATTGAAGAGTACACAAACCGCGTTGATATACTCTCGTTCAACCCCGAAACACTCACCATTAAAGCCCAACCTTCCCTCTCCCTGGACCACCCATACCCACCCACCAAGCTAATGTTCCAACCCAACGCCCACTCTTCTCTTCGAAAGTCCTCCTCCGACCTCCTCGCCACCTCCGGTGACTATCTCCGCCTCTGGGAAGTTGGGGAAAATTCCGTCGAGCCAATTTCACTACTCAACAATAGCAAGAGCAGCGAGTTCTGTGCCCCATTGACCTCCTTTGATTGGAACGAAATCGAACCCAAGAGAATTGGTACTTCAAGCATTGACACTACCTGTACCATTTGGGATATCGAAAAGGGGGTTGTTGAAACTCAGCTAATTGCCCACGATAAAGAGGTTTATGATATTGCTTGGGGTGAAGCTAGAGTCTTTGCATCTGTTTCTGCTGACGGATCTGTTAGAATATTCGACCTGAGGGACAAGGAGCACTCCACGATAATATACGAGAGTCCGCAACCAGATACCCCTTTGCTTAGACTGGCTTGGAATAAGAAGGATTTGAGTTACATGGCCACCATTATGATGGATAGcaataaaattgttattttggaTATAAGATCACCAGCGACGCCTGTGGCGAAGTTGGAGAGGCATCGTGCTAGTGTCAATGCTATTGCTTGGGCTCCCCAGAGTTGTAGGCATATTTGTTCGGCTGGTGATGATACGCAGACGCTCCTTTGGGAATTGCCTACTGTGGCTGGACCAGATGGGATTGATCCTATGTGCATGTATTCTGCTGGTTGTGAAATTAACCAACTTCAGTGGTCTGCTTCTCAGCCTGACTGGATTGCCATTGCTTTTGCGAACAAGATGCAGCTTTTGAAGGTTTG 1031 0.4724 MDNSTQESFLRSENSVTYESPYPLYAMAISSNPSITSHGQRIAVGSFIEEYTNRVDILSFNPETLTIKAQPSLSLDHPYPPTKLMFQPNAHSSLRKSSSDLLATSGDYLRLWEVGENSVEPISLLNNSKSSEFCAPLTSFDWNEIEPKRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKKDLSYMATIMMDSNKIVILDIRSPATPVAKLERHRASVNAIAWAPQSCRHICSAGDDTQTLLWELPTVAGPDGIDPMCMYSAGCEINQLQWSASQPDWIAIAFANKMQLLKV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03049 343 PANTHER WD REPEAT CONTAINING PROTEIN 1 343 IPR045159 -
Bva06g03049 343 SUPERFAMILY WD40 repeat-like 32 298 IPR036322 GO:0005515
Bva06g03049 343 Gene3D - 49 342 IPR015943 GO:0005515
Bva06g03049 343 Pfam WD domain, G-beta repeat 173 204 IPR001680 GO:0005515
Bva06g03049 343 PANTHER PROTEIN TRANSPARENT TESTA GLABRA 1 1 343 IPR031104 -
Bva06g03049 343 ProSiteProfiles Trp-Asp (WD) repeats profile. 173 213 IPR001680 GO:0005515
Bva06g03049 343 ProSitePatterns Trp-Asp (WD) repeats signature. 282 296 IPR019775 -
Bva06g03049 343 ProSiteProfiles Trp-Asp (WD) repeats profile. 262 296 IPR001680 GO:0005515
Bva06g03049 343 SMART WD40_4 255 295 IPR001680 GO:0005515
Bva06g03049 343 SMART WD40_4 166 204 IPR001680 GO:0005515
Bva06g03049 343 SMART WD40_4 118 163 IPR001680 GO:0005515
Bva06g03049 343 SMART WD40_4 68 113 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03049 Bva-Chr6 18892370 18893942 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03049 K11805 - cpap:110823444 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g03049 06 18892370 18893942 Bva06g03049 06 18892370 18893942 ECH