Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03038 ATGGCACCTCCTTTCCAGGCTGCAATACTCTGGGGTTCGCCTTCTTACCCAAATGCTATTGCCTGGTCTGAGGACAATTTAATTGCTGTCGCGTCTGGCAACCTTGTTACTATTCTGAGACCAGCAGTGACTTTTGGGCCCCGTGGTTTGATTACAATCACCGCTAGTGAACCTCCTGCCATTGGGGTGGTTGAAAGAAAAGATATACTCTCTGGATGCCTCTTGCCTATATGTTTGTCTCGAGATGATCAGTGTGTTGTTCGATCAATATCGTGGTCTCCACTTGGCATGGCATCAAACTCAGGGTGTCTGTTGACTGTTTGCACCACAGAAGGACATGTGAAAGTTTATCGTCCTCCCTTCTGTGAGTTCCGTGCTGAGTGGGTTGAGGTTGTAGACATAACAGAAAGGCTGTATGAATATCTTCAACGCACCGGATTTAGGGATTTggatatttcttcatttcatcGTTGTGAGATGCAAGTAGAGAGCCGAAGATCAGCAGATGAAATGCCAAACCCTGTATCAATGAAAGAACAGAAGCGGAGTGTTTCTGCGTCTAAATCTAAAGGGAAATCCTCGAAAGAAATATCTGAGAATCAAATGATAACTGCTGATCAATATACTTCTCGTAGTGCAATGCTATGTTCAATTGTTGTTTCCTGGTCTCCCTTGCTACATGTAACATCTGAGCTCAGTCCCATTCCTAATATTTATGCATCCATCAGTCTTCTTGCTATTGGAGCAAAGTCTGGTAAAATATCTTTCTGGAGATTTCATGCACCTGATTGCTATAATATTGAGGATGGAAGAGTCCCAATTGCTGTTAAGTTTGTTGGACTTCTTCAGGCACACGATTCGTGGGTCACAACAATTAGTTGGTTGTTGTTTGCTTCTGATTCTTCTAATCCTAAAATTTTGTTGGCTACtgggagttctgatgggagTGTGAGGATTTGGTTGGGCaacaatgataaattattgaaatcatCAGAAGTGAATCACGCCTCCTTTCTCTTGTTGAAGGAGGTTATAACTGTCAACATTGTCCCAGTTTCTGTACTTTCAGCAACTGTGCTTGATCAATCACTTTCCAAGATGCTTTTAGCCATCGGCAAAGGTTCTGGTTCATTTGAAATATGGCTTTGTGACATATCTTGTAGCGAATTTGTTAAGCTTGGGTCGTACGATGCACACGAACATGTTGTTACAGGTTTGGTCTGGGCATTTGGTGGAAGAATTTTGTACAGCTGTAGCCAGGACAACTCAGTGCGTAGCTGGATTTTACGTGAGGATCGCCTGGATGAAGTAGCTATCTCTTATGAAATTCCTGATAGTAGCAATTCAACTTGTcCTCCAGCAGATGTATTCGGTTCATGTAATGGTGTAGCTGTGTCCCCTGGGAGTCTTGTCATTGCTACTGTTCATTGCTTTGAACGAGAGAATCTGAACCGAATGTATGAAGGAAGGATTTATAAGGCAGCTGTTGAGTACTTTTGGATTGGTGGGCATCAAGCGGATGTTCTGTCCAAAACTCGTTTCTTATTTAATACTGAAGAACATCCCAGATTTCAAGAGAAGGAATTAGATTATTGGGACGCCAATATCATTTGGTCTTTGAAGCAATATCAATGTCTTGACAAGCCTCTAGTTCTTTGGGATATAATCGCAGCATTATCGTCTTTCAAGAAGTACAACTCAGAATATGTAGAACATATCCTAATGAAGTGGCTCTCAACTGCATTTTTGGGATCTGAATCATCTGATACGGACCTTCCTGTTGAAAAGGTTTTGTCACGTGTCTGTTCAACTTTGTCAGACAGTCCTTCTCGCCTTCTGCATATCCTCAATATAATCTGCAGACGTGTCGTGCTAGCAGATCTGAGTGCTGAtcaaataaatcaagtaaACAGCAAAATGCAAAACTTGGAAGGGTTATTTCCTGCTATTGAGAAGAAATTGGCCAAGTGGATAGAGATACTTATGAGCAGCGAAAGAGAAATCCGTGAAAGGCTTGtgggtttttgtttttcttctttcttaaccAACATGTCCTATCAAGAAGCAATTCCTTCCCAACCTGGTCATTGGCGTCCTGATGGACTTGCACAGATGGAACAGTGGATTGCATTGGATCAAGATCATGTGCGCGATCAACTCAAAGCCCTTGCATCAGAAGTTGGCACATATAAGGGCAGCAGGGTTGCAACCAGTGAATATTTTTCTGAGGAGCGATGCAGTTATTGTTCAGCACCAGTTCCATTTGAATCCCCAGAAGTTGGGTTTTGTGGAGGTGAGGACAACAACAGTGGAAGTGGCCATCGTCACAGGTTATCTAGATGTTCTGTTTCAATGCAGGTTTGCCCTATTACTCCATCATGGTTCTGTGTATGTTGCCATAGGTCGGCTTTTAAACTTGCACCAGAGACACTTTTTAAAATGTCCGCATATCCTCTAGATTTGAAATCTTCAACTGAATCATCTTCACAAGCAGTATCCTCAAGACCCTTATGTCCCTTTTGTGGGATACTGCTACAGAAACCCCAATTAGACTTTCTACTTTCTCCATCTCCTCTGTA 2579 0.4095 MAPPFQAAILWGSPSYPNAIAWSEDNLIAVASGNLVTILRPAVTFGPRGLITITASEPPAIGVVERKDILSGCLLPICLSRDDQCVVRSISWSPLGMASNSGCLLTVCTTEGHVKVYRPPFCEFRAEWVEVVDITERLYEYLQRTGFRDLDISSFHRCEMQVESRRSADEMPNPVSMKEQKRSVSASKSKGKSSKEISENQMITADQYTSRSAMLCSIVVSWSPLLHVTSELSPIPNIYASISLLAIGAKSGKISFWRFHAPDCYNIEDGRVPIAVKFVGLLQAHDSWVTTISWLLFASDSSNPKILLATGSSDGSVRIWLGNNDKLLKSSEVNHASFLLLKEVITVNIVPVSVLSATVLDQSLSKMLLAIGKGSGSFEIWLCDISCSEFVKLGSYDAHEHVVTGLVWAFGGRILYSCSQDNSVRSWILREDRLDEVAISYEIPDSSNSTCPPADVFGSCNGVAVSPGSLVIATVHCFERENLNRMYEGRIYKAAVEYFWIGGHQADVLSKTRFLFNTEEHPRFQEKELDYWDANIIWSLKQYQCLDKPLVLWDIIAALSSFKKYNSEYVEHILMKWLSTAFLGSESSDTDLPVEKVLSRVCSTLSDSPSRLLHILNIICRRVVLADLSADQINQVNSKMQNLEGLFPAIEKKLAKWIEILMSSEREIRERLVGFCFSSFLTNMSYQEAIPSQPGHWRPDGLAQMEQWIALDQDHVRDQLKALASEVGTYKGRVATSEYFSEERCSYCSAPVPFESPEVGFCGGEDNNSGSGHRHRLSRCSVSMQVCPITPSWFCVCCHRSAFKLAPETLFKMSAYPLDLKSSTESSSQAVSSRPLCPFCGILLQKPQLDFLLSPSPL 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03038 858 MobiDBLite consensus disorder prediction 163 198 - -
Bva06g03038 858 Pfam Transcription factor IIIC subunit delta N-term 14 167 IPR024761 -
Bva06g03038 858 ProSiteProfiles Trp-Asp (WD) repeats profile. 396 437 IPR001680 GO:0005515
Bva06g03038 858 SUPERFAMILY WD40 repeat-like 9 473 IPR036322 GO:0005515
Bva06g03038 858 Pfam WD domain, G-beta repeat 392 427 IPR001680 GO:0005515
Bva06g03038 858 Pfam WD domain, G-beta repeat 281 320 IPR001680 GO:0005515
Bva06g03038 858 PANTHER GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 1 843 - -
Bva06g03038 858 Gene3D - 341 479 IPR015943 GO:0005515
Bva06g03038 858 SMART WD40_4 389 428 IPR001680 GO:0005515
Bva06g03038 858 SMART WD40_4 3 40 IPR001680 GO:0005515
Bva06g03038 858 SMART WD40_4 275 321 IPR001680 GO:0005515
Bva06g03038 858 SMART WD40_4 73 118 IPR001680 GO:0005515
Bva06g03038 858 Gene3D - 68 335 IPR015943 GO:0005515
Bva06g03038 858 ProSiteProfiles Trp-Asp (WD) repeats profile. 307 320 IPR001680 GO:0005515
Bva06g03038 858 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 396 427 - -
Bva06g03038 858 PANTHER GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILY 1 843 IPR044230 GO:0000127|GO:0004402|GO:0006384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03038 - - gmx:100804583 1054.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g03038 06 18836978 18842915 Bva06g03038 06 18836978 18842915 ECH