Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g03002 ATGGCGGAACTGATAGGACCTCGGTTGTACAGCTGCTGTAATTGTAGAAACCATGTTTCAATTCATGATGATATAATTTCTAAGGCTTTTCAgGGAAGAAATGGTCGAGCTTTTCTATTCTCGCATGCTATGAATGTTGTGATAGGACCAAAAGAAGATAGGCATCTCTTAACTGGACTCCACACTGTTGCTGATGTCTATTGCGGGGATTGTCGTGAAGTGCTGGGTTGGAAATATGAAAGAGCTTATGAAGCATCACAGAAGTACAAGGAAGGGAAGTTCATACttgaaaagtcaaaaattGTGAAGGAGAACTGGTA 320 0.3937 MAELIGPRLYSCCNCRNHVSIHDDIISKAFQGRNGRAFLFSHAMNVVIGPKEDRHLLTGLHTVADVYCGDCREVLGWKYERAYEASQKYKEGKFILEKSKIVKENW 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g03002 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Bva06g03002 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
Bva06g03002 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 102 IPR004910 -
Bva06g03002 106 PANTHER PROTEIN YIPPEE-LIKE 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g03002 Bva-Chr6 18677625 18679366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g03002 - - qsu:112023683 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g03002 06 18677625 18679366 Bva06g03002 06 18677625 18679366 ECH