Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02998 ATGAAGCCCCTCAAAATCCACCTAGTTTCTTCCACCGACTCGCCCGATTTTGCCCTTCTGAACCAGGCATTGACTCGGACCTCACTCGTCGGGCTCGATGCCGAGTGGAAGCCGGTTCGTACTCACCGGACAGTTTTTCCTACCGTTTCGCTGCTCCAAATTGCCTGCCAACTCAATGGTCCGCTGGGAGGTGACTCGGACGAATCGGATGAGTACCTGGTTTTCCTGCTTGACCTCTTGTCCCTTCCCTTATCTTCATTATGGGAATCTCTGAGGAGCGTGTTTACCTCACCGGATATTTTGAAACTCGGATTTAGGTTTAAGCAGGATTTAATATACTTGTCCTCCACTTTCTGTTCTCAAGGCTGTGATCCTGGTTTTGACAGGGTTGAGCCCTATATGGATATTACAACTGTTTACAATCATCTGTTGCATGAGAGACCTGGAAGGAATTTaccaaagcaaattaaaagTTTGTCAACTATCTGTGGAGAAGTATTAGGCTTTTCTCTGTCAAAGGAACTTCAATGTAGTGATTGGTCACATCGTCCTCTTACTGAAGAGCAAATAACATATGCAGCTATGGATGCTCATTGCTTGCTAGAGATATTTAATGTCTTGAAGACAAAGATTTCCAAAGAAGGAAACTCAATTGTCAGCACAACTGAATTGTCTAATCTTGGTGAAAATCTTGGGTTGAAAGAAGTTTTCAGAAAGCATGATATGGGTAATAAAGTCCTAAGAACTGTATTTTGTGAAGCTTTAGATATTATCCAAGCCACTACATCTTCTGATGGTGCTCAGATAATAACTTCAACTGAGGGAATGGTCCCAAGATCACCTTGTTGGAGTACCATGCCAATGGATGAATTTTTGTTGAAGATTGTTAAAAGATATGGTGAAAAGATTTTACTAAAAGAGTCTGACAAGAAGCCTAAGACCtcaaaaaggaaagggaagacACAATCATCCGTGAAAGGGAcatgcaaagaaaaacaaatagagaAATTTGACGAATGGGAAGGTACCTCTCCTTGGGATCCATCAGTGGGGGGAGATGGATGTCCAAAGTTTCTCTGTGATGTAATGGTTGAAGGCTTGGCAAAACATTTACGGTGTGTTGGGATAGATGCTGCAATTCCATATACCAAGAAGCCTGAACCAAGGGAATTGATAGAACAAGCTCgcaaagagaagagagtgCTTTTGACACGAGATGCCAAGTTGCTTAGAcatgaatatttaataaaaaatcaaatatataaggTGAAGGGTCTTCACAAAAATGAACAGCTACTTGAGGTTATTGAAACTTTTCAACTGACAATTAGTGAGGATCAGCTTATGTCAAGGTGCACAAAATGCAATGGGAGATTTATTCAGAAGCCACTGACAACTGAAGAGGCTATCGAGGCTGCAAAGGGTTTTCAGAGAATTCCAGACTGCCTATTTGACAAGAATTTAGAGTTTTGGCAGTGTATGGACTGCCATCAACTTTACTGGGAGGGAACCCAATATCATAATGCTGTACAGAAATTTATCGACGTTTGCAAGTTGGGTGACTA 1565 0.393 MKPLKIHLVSSTDSPDFALLNQALTRTSLVGLDAEWKPVRTHRTVFPTVSLLQIACQLNGPLGGDSDESDEYLVFLLDLLSLPLSSLWESLRSVFTSPDILKLGFRFKQDLIYLSSTFCSQGCDPGFDRVEPYMDITTVYNHLLHERPGRNLPKQIKSLSTICGEVLGFSLSKELQCSDWSHRPLTEEQITYAAMDAHCLLEIFNVLKTKISKEGNSIVSTTELSNLGENLGLKEVFRKHDMGNKVLRTVFCEALDIIQATTSSDGAQIITSTEGMVPRSPCWSTMPMDEFLLKIVKRYGEKILLKESDKKPKTSKRKGKTQSSVKGTCKEKQIEKFDEWEGTSPWDPSVGGDGCPKFLCDVMVEGLAKHLRCVGIDAAIPYTKKPEPRELIEQARKEKRVLLTRDAKLLRHEYLIKNQIYKVKGLHKNEQLLEVIETFQLTISEDQLMSRCTKCNGRFIQKPLTTEEAIEAAKGFQRIPDCLFDKNLEFWQCMDCHQLYWEGTQYHNAVQKFIDVCKLGD 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02998 521 Gene3D - 3 217 IPR036397 GO:0003676
Bva06g02998 521 SMART 35exoneu6 8 212 IPR002562 GO:0003676|GO:0006139|GO:0008408
Bva06g02998 521 Pfam Mut7-C RNAse domain 356 512 IPR002782 -
Bva06g02998 521 PANTHER 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN 3 518 - -
Bva06g02998 521 Pfam 3'-5' exonuclease 12 211 IPR002562 GO:0003676|GO:0006139|GO:0008408
Bva06g02998 521 SUPERFAMILY Ribonuclease H-like 5 215 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02998 Bva-Chr6 18661072 18666059 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02998 K09122 - pvy:116125184 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02998 06 18661072 18666059 Bva06g02998 06 18661072 18666059 ECH