Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02993 ATGGCTGAGTGGCACTCGCTCCTCCAATCCGTTGTCCTTGGCCTCATTTTCTCTTACCTTCTGGCAAAGCTCATCTCCATTGTCGTCTCATTCAAGGACGAGAATCTGACTATAACTCGTAGCAGCAACGTCCATAGAAGCAATCGGAGCACTACAGCAGCCGAGTCCAAATTCGCCAACATTGCAGCGGATAAGCGCCCGTTTAGGCCCAGGTCTGGTTCCGATGTAAGCGAAATCCACGAGGCCGACTCGGTGATGGCCGAGCAGGGCAGTGTGAGAAATGAAAGTGTGGATGGTGATGATGACTACGATGACGATTGGGAAGGGGTGGAAAGTACGGAATTGGACGAGGCCTTCAGTGCTGCCACGGCTTTTGTGGCTGCTGCCGCTGCCGATCGGGTCTCCCAGAAGGTATCCACTGATGTGCAGCTGCAGCTATACGGGTTGTACAAGATTGCCACGGAAGGACCGTGTAGTACGCCACAGCCGTCGGCACTGAAAATGACGGCTCGAGCCAAATGGCAAGCATGGCAGAAATTGGGTGCTATGCCTCCTGAAGATGCAATGCAGAAGTACATAGAAATTGTGACAGAGCTATATCCTACTTGGGCTGATGGCTCGGCTTTGAAGAGCAAAGGCAGGGACAGTGGTGGCTCAAGTTCAGAGGCTAAGGGGCCAATGGGACCAGTATTCAGCACTTTTGTGTATGAAGAAGAGGAATCGGGCACTGATTTGAAAATGGATGCTGTCCACGGATTTGCCAGAGAAGGAGATGTGGCTAATCTGCTCAAGAGTATTGAAAGTGGTGTTTCAGTGAATTTGAAGGATAGTGAGGGTCAGACACCATTACATTGGGCAGTGGATCGTGGTCACCTTAATGTCACAGAATTGCTCGTTAGCAAGAACGCCAATGTAAATGCCAAGGATAATGATGGGCAAACTCCGTTGCATTATGCTGCTGTTTGTGAGAGAGAAGACATAGCTCAGTATCTTGTGAAGCATAACGCAGACACGGGGTTAAAGGATAACGATGGCAATTTCCCTTGTGACGTCTGTGAGTCAAACTGGTCTTGGATGCAACCAGAGAGGGaagcaaatta 1100 0.4973 MAEWHSLLQSVVLGLIFSYLLAKLISIVVSFKDENLTITRSSNVHRSNRSTTAAESKFANIAADKRPFRPRSGSDVSEIHEADSVMAEQGSVRNESVDGDDDYDDDWEGVESTELDEAFSAATAFVAAAAADRVSQKVSTDVQLQLYGLYKIATEGPCSTPQPSALKMTARAKWQAWQKLGAMPPEDAMQKYIEIVTELYPTWADGSALKSKGRDSGGSSSEAKGPMGPVFSTFVYEEEESGTDLKMDAVHGFAREGDVANLLKSIESGVSVNLKDSEGQTPLHWAVDRGHLNVTELLVSKNANVNAKDNDGQTPLHYAAVCEREDIAQYLVKHNADTGLKDNDGNFPCDVCESNWSWMQPEREAN 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02993 366 ProSiteProfiles Ankyrin repeat profile. 311 343 IPR002110 GO:0005515
Bva06g02993 366 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 2 1 360 - -
Bva06g02993 366 SUPERFAMILY Acyl-CoA binding protein 114 204 IPR035984 GO:0000062
Bva06g02993 366 SUPERFAMILY Ankyrin repeat 246 354 IPR036770 -
Bva06g02993 366 Gene3D - 233 357 IPR036770 -
Bva06g02993 366 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 1 360 - -
Bva06g02993 366 ProSiteProfiles Ankyrin repeat region circular profile. 278 310 - -
Bva06g02993 366 Pfam Ankyrin repeats (3 copies) 253 342 IPR002110 GO:0005515
Bva06g02993 366 MobiDBLite consensus disorder prediction 207 226 - -
Bva06g02993 366 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 115 205 IPR000582 GO:0000062
Bva06g02993 366 Gene3D - 109 221 IPR014352 -
Bva06g02993 366 ProSiteProfiles Ankyrin repeat region circular profile. 311 343 - -
Bva06g02993 366 Pfam Acyl CoA binding protein 116 196 IPR000582 GO:0000062
Bva06g02993 366 MobiDBLite consensus disorder prediction 82 103 - -
Bva06g02993 366 SMART ANK_2a 278 307 IPR002110 GO:0005515
Bva06g02993 366 SMART ANK_2a 311 340 IPR002110 GO:0005515
Bva06g02993 366 PRINTS Ankyrin repeat signature 327 341 IPR002110 GO:0005515
Bva06g02993 366 PRINTS Ankyrin repeat signature 279 294 IPR002110 GO:0005515
Bva06g02993 366 PRINTS Acyl-coA-binding protein signature 138 156 IPR000582 GO:0000062
Bva06g02993 366 PRINTS Acyl-coA-binding protein signature 182 199 IPR000582 GO:0000062
Bva06g02993 366 PRINTS Acyl-coA-binding protein signature 161 176 IPR000582 GO:0000062
Bva06g02993 366 ProSiteProfiles Ankyrin repeat profile. 278 310 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02993 Bva-Chr6 18630454 18634499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02993 1 366 Acyl Lipid Metabolism Gene Families AT5G53470 63.388 3.93e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02993 - - gmx:100816670 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02993 06 18630454 18634499 Bva06g02993 06 18630454 18634499 ECH