Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02980 ATGGAGTCTCTGGGAATGGCTCGAGTGATTCAGTCTAGACCATCTATAAATCCGGCGCTAATTAAACACAATTCTGCAGTGATAAGgcaattgaaattttcttctctgtgCAAAAGGAGGTGTAAAAATAGTGCCTTGCGCATTAGAAGATCATTTTCTGGCAGAAGTGATAGTAAGGTTAGTGCTTCGCATGACGAGTCCTCCGttgttgaagatgaagaagaagaaaaagaagaaggtgaagaaaAGCCTCTCCTCTTAGCTGGAgagatggatgattctggcTCTCTGATTGGCTTTTATTTGATTCCCGAATCGGGCAAGTTAGTTGAAAAACATGCAACTACTGATAGAGTAGAAGATTACGAGGACatagaaggagaagagaaagttCAGACTAGAGCATCCTCTGTAATTGTTTTCGTTACAGCTGAAGCTGCACCATATTCCAAGACTGGAGGCCTGGGAGATGTTTGTGGTTCTTTGCCTATAGCACTTGCAGCTCGTGGACATCGCGTAATGGTTGTCTCTCCTAGATATCAACACGGTACTTCTGAGAATCAGAAGTTTGCTTGTGCAGTTGATCTTAATTGTCCAACCAAATTATTTTGCTTTGGAGGGGTGCAAGAAGTTGGCTTTTTCCATGAGTATAGAAAAGGTGTTGATTGGGTATTTGTGGATCACCCCTCATACCATAGACCTGGAAATCCATATGGGGATAACTATGGTGGTTTTGGTGATAATCAGtttcggttcactttacTTTGCCATGCAGCCCTTGAGGCCCCATTGGTACTTCCGTTGGGAGGGTTCACTTATGGAGAGAAATGTTTATTCCTCGCTAATGATTGGCACGCAGGCTTAGTTCCAGTACTTCTTGCAGCGAAGTATCGTCCACATGGTGTGTATAAAGATGCACGCAGTATATTAGTGATACATAACCTGGCACATCAGGGAGTGGAAGCTGCAATTACATACAACAATTTGGGATTACCTCCAGAATGGCGTGCAGCACTGGAATGGGTGTTCCCAACTTGGGCAAGGACACATGCCCTTGACACAGGGGAAGCTGTCAATTTCTTAAAAGGTGCAATTGTGACAGCTGATCGGATACTAACAGTAAGCCAGGGATATTCCTGGGAGATTACTACTAGTGAAGGCGGATATGGTCTGCATGAGCTATTATATAGTCGAAGAAGTGTTCTAAATGGAATCACAAATGGAATTGATGTTTCTGAATGGGACCCGTCATCAGATAAGCATCTTGATGCCCACTATTCCGCTGATGACCTTTCTGGGAAGGTCCGATGCAAGATTTCTTTACAGAAGGAACTGGATCTTCCCGTTAGGCCTGAATGTCCACTGATTGGATTCATTGGAAGACTAGACTATCAGAAAGGCATTGACTTGATTCGTTTGGCAACTCCTGAGATTTTGGAAGATGATGTGCAATTTgTAATGCTTGGTTCTGGAAACCCGCATTATGAAGATTGGATGAAAGCAACAGAGGTGGCTTATAGAGACAAATTTCGGGGCTGGGTTGGGTTTAATGTTCCAATTTCTCATAGAATAACTGCAGGCTGCGATATACTGTTAATGCCATCCATGTTTGAGCCATGTGGACTAAATCAGTTGTATGCAATGAGATATGGAACTATACCCGTGGTTCACTGCACTGGGGGATTAAGAGATACAGTTCAACATTATAATCCATATGCTGATGAGGGACATGGCGAAGGCACAGGGTGGACATTTTCTCCACCCACAAAAGAGAACATGTTAATGGCACTGAGATTTGCCCTTCAAACATATAGAGAATACGACTCTTCTTGGGTGGGACTAATGAAGAGAGGCATGACAAGTAACTTCACATGGATAAATGCTGCCATTCAATATGAGCAACTCTTTGAGTGGGCGTTCCTTGATCCACCTTACACTGGCTG 1943 0.4102 MESLGMARVIQSRPSINPALIKHNSAVIRQLKFSSLCKRRCKNSALRIRRSFSGRSDSKVSASHDESSVVEDEEEEKEEGEEKPLLLAGEMDDSGSLIGFYLIPESGKLVEKHATTDRVEDYEDIEGEEKVQTRASSVIVFVTAEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYQHGTSENQKFACAVDLNCPTKLFCFGGVQEVGFFHEYRKGVDWVFVDHPSYHRPGNPYGDNYGGFGDNQFRFTLLCHAALEAPLVLPLGGFTYGEKCLFLANDWHAGLVPVLLAAKYRPHGVYKDARSILVIHNLAHQGVEAAITYNNLGLPPEWRAALEWVFPTWARTHALDTGEAVNFLKGAIVTADRILTVSQGYSWEITTSEGGYGLHELLYSRRSVLNGITNGIDVSEWDPSSDKHLDAHYSADDLSGKVRCKISLQKELDLPVRPECPLIGFIGRLDYQKGIDLIRLATPEILEDDVQFVMLGSGNPHYEDWMKATEVAYRDKFRGWVGFNVPISHRITAGCDILLMPSMFEPCGLNQLYAMRYGTIPVVHCTGGLRDTVQHYNPYADEGHGEGTGWTFSPPTKENMLMALRFALQTYREYDSSWVGLMKRGMTSNFTWINAAIQYEQLFEWAFLDPPYTG 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02980 647 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 24 646 - -
Bva06g02980 647 Gene3D Glycogen Phosphorylase B; 411 622 - -
Bva06g02980 647 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 136 637 - -
Bva06g02980 647 MobiDBLite consensus disorder prediction 56 84 - -
Bva06g02980 647 PANTHER STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 24 646 - -
Bva06g02980 647 CDD GT5_Glycogen_synthase_DULL1-like 139 638 - -
Bva06g02980 647 Pfam Glycosyl transferases group 1 454 604 IPR001296 GO:0016757
Bva06g02980 647 Gene3D Glycogen Phosphorylase B; 157 636 - -
Bva06g02980 647 Hamap Glycogen synthase [glgA]. 137 639 IPR011835 GO:0004373
Bva06g02980 647 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 139 637 IPR011835 GO:0004373
Bva06g02980 647 Pfam Starch synthase catalytic domain 139 395 IPR013534 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02980 Bva-Chr6 18573648 18579773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02980 108 636 Glycosyltransferase AT3G01180 49.165 2.06e-164 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02980 K00703 - qsu:112034608 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02980 06 18573648 18579773 Bva06g02980 06 18573648 18579773 ECH