Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02940 ATGAATTACGTAGGTCCGGGACCATCTCTGACACACTTTTATCAGGTTTCAGATTCAGAAGCAGTTAGAGGGGCGCAAATCCCTACTAGGGTCGCTGCAATGATGGTTCCAATATATCGCGATAAATCAAAATTGCCAAATCTGCGATCTCCGTTTATCTCTCCGTCGAGAAGACCAATCTCTCTACTCTCTATGGTTCGAGAAAAAGATATCTGCTGGGAATATGCAGAAAAATTAGATGGAAACAAGGTAAAATGCAAATTTTGccaaagaattttaaatggtGGTATCAGTAGATTGAAGCACCATTTATCTCGACTTCCAAGTAAAGGTGTGAATCCTTGTAGCAAGGTCAGAGACGAAGTCACAGACAGAGTAAGGGCTATAATAGCGTCAAAGGAAGAGGTGAAGGAAACCTCTACTgtgaaaaagcaaaaactaACTGAAGTCAAGTCTCTTGGTATTGCCTCCACACCTAAAGCTCTTATATCTATGGATGCAATATCACCTATTATGAAGGTTTTTCCTACTGTCTCTCCTATGGCGTCCCCCTCTATGAACAACCAAGAGAATGCAGAGAAAAGCattgctcttttctttttcgagAATAAGCTAGACTTCAGTGTTGCACGATCTTCATCCTATCAGCTTATGATTGATGCCATAGCTAAGTGTGGTCCTGGATTTACTGGTCCATCAGCAGAAACGCTTAAGACAACTTGGCTGGAACGGATCAAATCAGAAGTGGGATTGCAATCAAAAGATGTTGAGAAAGAGTGGACAACCACAGGTTGTACCGTCATTGCAGACACATGGACTGACAATAAATCAAGAGCCTTGATTAATTTCTTAGTCTCATCACCGTCCAGGACCTTTTTTCACAAATCTGTGGATGCATCTGCATATTTCAAGAATACAAAATGCCTTGCTGATCTTTTTGATTCTGTTATTCAAGAGTTTGGCCCAGAAAATGTCGTGCAAATTATCATGGATAGCAGTTTTAACTACACTGGTATTGCCAGTCATATCGTTCAGAACTATGGAACCATATTTGTATCTCCATGTGCCTCGCAATGTTTAAACCTAATATTGGAGGAATTCTCGAGGGTAGATTGGGTTAGTAGATGTATTCTACAAGCTCAAACCATATCAAAGTTCATATACAATAATGCCTCATTGCTTGATCTCATGAAGAAGTTCACAGGCGGCCAGGATCTCATCAGGACTGGCATTACAAAGTCAGTATCTAACTTCCTCTCGTTACAGTCTATGTTGAAGCAAAGGACAAGATTGAAGCATATGTTCCACAGCCCTGAATATGCCTCAAACTCCTCTTATCCAAATAAGCCGCAAAGTCTCTCTTGTATTGCAATTGCTGAAGACGCTGATTTCTGGAGGACAGTGGAAGAGTGCGTGGCCATATCTGAGCCTTTTCTCAAAGTGTTGAGGGAAGTATCCGAAGGGAAACCAACTGTAGGTTTCATATATGAACTAATGACCAGGGCTAAGGAATCAATCAGGACGTACTATATAATGGACGAGAACAAATGCAAGACATTTTTAGATATAGTGGATAAGAAGTGGCGTGACCAACTGCATTCACCTCTACATGCAGCTGCAGCCTTTTTAAACCCCAGTATTCAATATAATcctgaaataaaatttctttcctccaTAAAAGAAGACTTCTATAAGGTTCTGGAGAAATTACTTCCAGTACCTGATATGAGGCGCGACATCACCAATCAAATCTACACTTTTACGAAGGCTCATGGGATGTTTGGTTGTAGCCTAGCAAAGGAGGCAAGAACTACAGTTTCACCATGGCTTTGGTGGGAACAGTATGGAGATTCTGCACCTGGGTTGCAACGAGTTGCAATTAGGATATTAAGTCAAGTTTGTAGCACCTTCTCATTTCAGAGGCACTGGAGTACATTTCAGCAAATTCACTCTGAGAAACGGAACAAAATTGATAGAGAGACATTGAATGACcttgtttatataaattacaatcTCAAGTTGGCTAAACAAATGAAAGCAAAGCCATTAGAAGTTGATCCACTTCAAGTTGATGATATTGATATGACTTCTGAATGGGTGGAGGAGAGTGAAAATACTAGTCCCACTCAGTGGCTGGATCGTTTTGGTACTGCCTTGGATGGGAGTGATCTGAATACAAGACAGTTTAGTGCTGCTATGTTTGGTGCAAATGACCCAATATTTGGATTGTA 2231 0.3926 MNYVGPGPSLTHFYQVSDSEAVRGAQIPTRVAAMMVPIYRDKSKLPNLRSPFISPSRRPISLLSMVREKDICWEYAEKLDGNKVKCKFCQRILNGGISRLKHHLSRLPSKGVNPCSKVRDEVTDRVRAIIASKEEVKETSTVKKQKLTEVKSLGIASTPKALISMDAISPIMKVFPTVSPMASPSMNNQENAEKSIALFFFENKLDFSVARSSSYQLMIDAIAKCGPGFTGPSAETLKTTWLERIKSEVGLQSKDVEKEWTTTGCTVIADTWTDNKSRALINFLVSSPSRTFFHKSVDASAYFKNTKCLADLFDSVIQEFGPENVVQIIMDSSFNYTGIASHIVQNYGTIFVSPCASQCLNLILEEFSRVDWVSRCILQAQTISKFIYNNASLLDLMKKFTGGQDLIRTGITKSVSNFLSLQSMLKQRTRLKHMFHSPEYASNSSYPNKPQSLSCIAIAEDADFWRTVEECVAISEPFLKVLREVSEGKPTVGFIYELMTRAKESIRTYYIMDENKCKTFLDIVDKKWRDQLHSPLHAAAAFLNPSIQYNPEIKFLSSIKEDFYKVLEKLLPVPDMRRDITNQIYTFTKAHGMFGCSLAKEARTTVSPWLWWEQYGDSAPGLQRVAIRILSQVCSTFSFQRHWSTFQQIHSEKRNKIDRETLNDLVYINYNLKLAKQMKAKPLEVDPLQVDDIDMTSEWVEESENTSPTQWLDRFGTALDGSDLNTRQFSAAMFGANDPIFGL 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02940 743 Pfam Protein of unknown function (DUF 659) 232 383 IPR007021 -
Bva06g02940 743 PANTHER HAT TRANSPOSON SUPERFAMILY 66 737 - -
Bva06g02940 743 SUPERFAMILY Ribonuclease H-like 255 674 IPR012337 -
Bva06g02940 743 Pfam hAT family C-terminal dimerisation region 604 672 IPR008906 GO:0046983
Bva06g02940 743 ProSiteProfiles Zinc finger BED-type profile. 67 122 IPR003656 GO:0003677
Bva06g02940 743 PANTHER OSJNBA0013A04.12 PROTEIN 66 737 - -
Bva06g02940 743 Pfam BED zinc finger 73 106 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02940 Bva-Chr6 18320399 18325916 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02940 - - adu:107460619 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02940 06 18320399 18325916 Bva06g02940 06 18320399 18325916 ECH