Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02928 ATGAGAGGACCCTCCCCCAGCAACGTAGAGCCACGGCATCGATTGTCCGCTTCTACAAATGAAGATACTAACAAGAGAAGGTCTCAGAAAAGTAAAGATTTTAAAGATGTTGAGAAGGCATTGCATGTTTCAATTCAAGAGAGGAGTTGCAAACCTACCTGGAAGCTGGttttagttataattattttgggaACCTTAGTTACAATTCTCCATCCTCCAGCTGTTTATAATACTGATAATTTTTCAAGCACTGTAGCATGGCCAACTTTCGTGGACAAGTGGAAAAGAGAGTTTGATGGCACTGATCCACGTTATGTATCAGTCTTAAATATTGAGTGGGACCAAATATCAAAAGTTCTTGAAAGATTGACAGACAAGGACACATATCAGGGAGTTGGATTGTTAAACTTTAATGACAGTGAGATTGACCATTGGAAGGAGCTGACACCAGAAGCTGAGCATGTAGTCTTGCGCCTGAACTATGCTTCAAACAACATTACATGGGAAGTCCTGTACCCGGAATGGATTGACGAAGAAGAGAACTATGAGGTTCCTACTTGTCCTACACTTCCTAGGATTCAGGTACCTGGAAAACCACGGCTTGATCTTATCGCTGTCAAGCTACCCTGCAACAAGTCAAGGCACTGGTCAAGAGATGTGGCTCGTTTGCACTTGCAGCTTGAAGCTGCAAGACTTGCTGCCTTTTCCAAAAGTTATCATCCAGTCCGTGTTCTTTTGGTCACTGACTGCTTCCCTGCCCCAAATCTCTTTACTTGTAAGGAACTCATTCAACATAAAGGATATGCATGGCTTTACGAGCCCAACCTTAACACCCTGAGAGAAAAGCTGCAGCTGCCAGTGGGGTCATGTGAACTAGCAGTTCCTCTCAAGGCTAAAGAACATTTTCACTTGGGAAGAGCACACCGAGAAGCGTATGCAACCATCTTACACTCTGCACACTTCTATGTTTGTGGAGCTATTGTCGTAGCTCAGAGTATCCGCATGGCTGGTTCGACGCGAGATCTTGTGATTCTTGTCGATGAAACAATTAGTGACTATCATAGAGGGGGCTTGGAGGCTGCTGGATGGAAGGTCCATACAATCCAAAGAATCAGAAATCCAAAAGCTGAGCCAGAGGCATACAACGAGTGGAACTACAGCAAATTCCGTCTCTGGCAGCTAACGGATTATgacaaaatcattttcattgatGCTGACCTGCTTATTCTTAGAAATATTGATTTCCTTTTTGAGATGCCTGAGATTACAGCTATAGGTAACAATGCTACACTGTTCAACTCGGGTGTAATGCTAATTGAACCATCAAATTGCACATTTCAACTGCTAATGGATCACATCAATGAAATTGTCTCTTACAATGGCGGGGACCAGGGGTATCTGAATGACATCTTCACATGGTGGCATCGGATTCCAAAACATATGAATTTCTTGAAGCACTTCTGGGAAGGTGATGAgccagagaagaaagagatgaaaacGCGTCTCTTTGGAGCTGATCCTCCAGTTCTTTATGTCCTCCATTATCTGGGTACTAAACCATGGCTTTGCTTCCGAGACTACGACTGCAACTGGAATGTGGACATTCTGCAGGAGTTTGCTAGTGATGTAGCTCATGCAAGATGGTGGAAGGTACACGATGCCATGCCAGAAAACTTACAGAAATTCTGTTTGCTCAGGTCTAAGCAGAAGGCAGCATTAGAGTGGGACCGTAGACAAGCAGAGAAAGGAAACTACACTGATGGTCATtggaaaataaagataaaagacaAGAGGTTAGAAACATGCTTTGAGGATTTCTGCTTCTGGGAGAGCATGTTATGGCACTGGGGCGAAACGAACTGGACAGATAATGCTACTGTTAATTCACCACCTGCCAGTACTACcatatctctttcttctttatg 1925 0.4182 MRGPSPSNVEPRHRLSASTNEDTNKRRSQKSKDFKDVEKALHVSIQERSCKPTWKLVLVIIILGTLVTILHPPAVYNTDNFSSTVAWPTFVDKWKREFDGTDPRYVSVLNIEWDQISKVLERLTDKDTYQGVGLLNFNDSEIDHWKELTPEAEHVVLRLNYASNNITWEVLYPEWIDEEENYEVPTCPTLPRIQVPGKPRLDLIAVKLPCNKSRHWSRDVARLHLQLEAARLAAFSKSYHPVRVLLVTDCFPAPNLFTCKELIQHKGYAWLYEPNLNTLREKLQLPVGSCELAVPLKAKEHFHLGRAHREAYATILHSAHFYVCGAIVVAQSIRMAGSTRDLVILVDETISDYHRGGLEAAGWKVHTIQRIRNPKAEPEAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPEITAIGNNATLFNSGVMLIEPSNCTFQLLMDHINEIVSYNGGDQGYLNDIFTWWHRIPKHMNFLKHFWEGDEPEKKEMKTRLFGADPPVLYVLHYLGTKPWLCFRDYDCNWNVDILQEFASDVAHARWWKVHDAMPENLQKFCLLRSKQKAALEWDRRQAEKGNYTDGHWKIKIKDKRLETCFEDFCFWESMLWHWGETNWTDNATVNSPPASTTISLSSL 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02928 641 PANTHER GLYCOGENIN SUBFAMILY MEMBER 15 623 - -
Bva06g02928 641 MobiDBLite consensus disorder prediction 15 33 - -
Bva06g02928 641 SUPERFAMILY Nucleotide-diphospho-sugar transferases 310 560 IPR029044 -
Bva06g02928 641 MobiDBLite consensus disorder prediction 1 33 - -
Bva06g02928 641 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 307 558 IPR029044 -
Bva06g02928 641 CDD GT8_Glycogenin 310 555 - -
Bva06g02928 641 Pfam Glycosyl transferase family 8 317 522 IPR002495 GO:0016757
Bva06g02928 641 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED 15 623 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02928 Bva-Chr6 18261224 18265414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02928 4 618 Glycosyltransferase AT1G77130 68.921 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02928 K20890 - gmx:100787339 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02928 06 18261224 18265414 Bva06g02928 06 18261224 18265414 ECH