Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02924 atgatAACAGCAAATGATTTCTACAAGGTGATGTGTGCAATGGTTCCTCTGTACTTCGCCATGTTAGTAGCCTATGGTTCAGTAAAATGGTGCAAGATCTTTACACCACAGCAGTGCTCCGGCATCAACCGTTTCGTGGCAGTGTTTGCAGTTCCCGTTCTGTCTTTCCATTTCATTTCTCAGAACAATCCCTACCAAATGGACACCAAATTCATAATAGCCGACACTATCTCTAAGTTCATGGTCCTACTCTTGCTCTCTGTCTGGGCCATCTTCTTTAAAAGTGGCAGCTTGGAATGGCTCATCACTCTCTTCTCACTTGCCACTTTGCCCAACACACTTGTCATGGGCATCCCTTTGCTCCAAGCCATGTACGGCGACTTCACCCAGTCCCTTATGGTGCAACTAGTTGTACTTCAATGCATCATATGGTATACGCTACTGCTGTTCTTGTTTGAATATAGAGCTGCGACGCATTTAATAGAAACACAATTCCCTGGGCCCACAGCAGCCTCCATAACCAAATTTGAGATTGACGATGATGTCATCTCCCTCGACGGCCGTCAAGCTCCGCTTCGCACGGAATCCGAAACCGACAACCATGGACGTATACGTGTCCGAATCCGACGGTCTACGTCCTCTGCTCCTGACTCTGCCTTGTCTTCCTCAATAGGCATCACCCCGAGACCCTCCAACCTCTCCAACGCTGACATCTTCTCCGTGAACACGCCATCACATTTACACGACTTTCACAATGCTCTTGCGGCGGTGGCGGGAGGTGGCGTGGATGTCGGATTCGGGCACGGCGATCTGACACTGGGGTACCCTTCGGCGAGCCCACGGCAATCTGGGTACGCGTCTTCCGATGCTTACTCGCTCCAACCAACCCCACGAGCATCGAATTTTAATGAGCAGGAGACGACAACGACGACGAGCACGCCGGTGTGGGCGAGGTCTCCAGTTTCCGGAGGCGGTAAGGTGTACCGGCAGTCACCTCCGGCATTTTCGGGGGCGAGGGTGGTGCTGGAGTCGCCGGGCAAATGTCAAGGCGGGGAGAGACAAGTACGCAAAGAAATTATTGAGTCAGagaaagaaattagcTTCAGGGACAACACAAAAGTCCCAATGCCGGATGAAGGTGCAGGGTCCAAAGATGAGCAGAAAATGCCACATGCAATTGTCATGACAAGGCTTATACTCATCGTGGTTGCAAGGAAACTTTCCCGTAACCCTAACACATATTCCAGTGTACTAGGGCTTCTTTGGTCTCTCGTCTCTTTCAaATGGAACGTGGGTATGCCTAGTTTGATCAAGTCATCTGTCCAAATAATCTCCGATGCTGGCCTTGGAATGGCTATGTTTAGTTTAGGGCTGTTCATGGCTCTACAGCCTCGGATCATCGCCTGCGGCACCAAAAGAGCCGTCGTGGGAATGGCTATTCGCTTCATTTGTGGGCCTCTGGTAATGTCTGCCGCTTCCATTGCCATCGGACTCAGAGGACCAAAACTACGTACAGCCATTGTACAGGCGGCTCTTCCACAAGGGATTGTGCCATTTGTATTCGCAAGAGAATATGGGCTGCACCCTGACATTTTGAGTACCGGGGTTATCTTTGGCATGTTAGTTTCTTTACCTGTAACACTCCTATATTACGTACTTCTTGGCCTTTA 1670 0.4976 MITANDFYKVMCAMVPLYFAMLVAYGSVKWCKIFTPQQCSGINRFVAVFAVPVLSFHFISQNNPYQMDTKFIIADTISKFMVLLLLSVWAIFFKSGSLEWLITLFSLATLPNTLVMGIPLLQAMYGDFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATHLIETQFPGPTAASITKFEIDDDVISLDGRQAPLRTESETDNHGRIRVRIRRSTSSAPDSALSSSIGITPRPSNLSNADIFSVNTPSHLHDFHNALAAVAGGGVDVGFGHGDLTLGYPSASPRQSGYASSDAYSLQPTPRASNFNEQETTTTTSTPVWARSPVSGGGKVYRQSPPAFSGARVVLESPGKCQGGERQVRKEIIESEKEISFRDNTKVPMPDEGAGSKDEQKMPHAIVMTRLILIVVARKLSRNPNTYSSVLGLLWSLVSFKWNVGMPSLIKSSVQIISDAGLGMAMFSLGLFMALQPRIIACGTKRAVVGMAIRFICGPLVMSAASIAIGLRGPKLRTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLYYVLLGL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02924 556 Pfam Membrane transport protein 10 551 IPR004776 GO:0016021|GO:0055085
Bva06g02924 556 TIGRFAM 2a69: auxin efflux carrier 1 556 IPR014024 -
Bva06g02924 556 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 556 - -
Bva06g02924 556 MobiDBLite consensus disorder prediction 279 318 - -
Bva06g02924 556 PANTHER AUXIN EFFLUX CARRIER COMPONENT 6 1 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02924 Bva-Chr6 18243025 18247652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02924 1 534 Organic Solute Cotransporters AT1G77110 65.603 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02924 K13947 - vvi:100250503 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02924 06 18243025 18247652 Bva06g02924 06 18243025 18247652 ECH