Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02918 ATGGCACTTCTGGAGAATTGCTTACGAGTAACCACAGTAGGCAGAGCCATACCCCAATCCCAATGtcttcattcattttcttcaaattcaaaggaAAAGCTTTATTTCCCAACATACAGAGGATTCAAGAAATCTAGGTTAACATCCATAGAATCGACCCCAAATTCTCTTCATTCAACCCATGGTAACTACAGAAAATCCCGCATTATCTGCAAAGCTGGTAAAGCAATAAGTGAAGTTCGAGAGGTGACAGATTCAAGCTGGGAGAGCCTTGTAGTAGCAAGTGAAAGCCCTGTGCTGGTGGAGTTTTGGGCACCATGGTGTGGTCCGTGCAGGATGATTGCACCAATTATTGATGAATTAGCAAAGGAATATGCTGGAAAAATTGTGTGCTTCAAGGTCAACACCGATGACTGCCCAAGCATAGCCTCACAATGTGGAATCAGAAGCATACCCACCGTTCTCTTCTTcaagaaaggagagaaaaaggaaagtatTATCGGCGCAGTTCCCAAGTCCACCTTGACTGCAGCAGtagataaatatattgatgttTA 557 0.3914 MALLENCLRVTTVGRAIPQSQCLHSFSSNSKEKLYFPTYRGFKKSRLTSIESTPNSLHSTHGNYRKSRIICKAGKAISEVREVTDSSWESLVVASESPVLVEFWAPWCGPCRMIAPIIDELAKEYAGKIVCFKVNTDDCPSIASQCGIRSIPTVLFFKKGEKKESIIGAVPKSTLTAAVDKYIDV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02918 185 PANTHER THIOREDOXIN M-TYPE PROTEIN 28 183 - -
Bva06g02918 185 Gene3D Glutaredoxin 79 184 - -
Bva06g02918 185 SUPERFAMILY Thioredoxin-like 71 184 IPR036249 -
Bva06g02918 185 ProSiteProfiles Thioredoxin domain profile. 71 184 IPR013766 -
Bva06g02918 185 ProSitePatterns Thioredoxin family active site. 100 118 IPR017937 -
Bva06g02918 185 Pfam Thioredoxin 80 180 IPR013766 -
Bva06g02918 185 CDD TRX_family 86 180 - -
Bva06g02918 185 PRINTS Thioredoxin family signature 107 116 - -
Bva06g02918 185 PRINTS Thioredoxin family signature 147 158 - -
Bva06g02918 185 PRINTS Thioredoxin family signature 99 107 - -
Bva06g02918 185 PANTHER GEO12009P1 28 183 - -
Bva06g02918 185 TIGRFAM thioredoxin: thioredoxin 84 181 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02918 Bva-Chr6 18201692 18202899 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02918 K03671 - gmx:100500292 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02918 06 18201692 18202899 Bva06g02918 06 18201692 18202899 ECH