Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02905 ATGGCAGTATGGTTATTGGCAAGGTCTAGAGCCCACCAACTAGTTGCCAAAAAGCTGGCCCTCTTGGGAGTTCTGAAACAGAGCTCTTGCTCTTTGCGATCTGCTGATTCTTCTTCACTTACAGTGCCACCAGCATTACTGGGTAGCTGCAACAACTCAGCTACCCGTTTCTTCTTTTCGCGTTATGAATCCACCAAAGCTCATACACAATTTAAACAACAATATATTAGCGAGGATAAGGATGATCAGGCGATTGATTTTCCTGGAGGCAGAGTTGCATTTACTTCGGAAATGAGATTCATCGCTGAGTCTGCTAATAAGAGAGTACCCTGCTATAGAGTTCTTGATGACAATGGAGAGCCTATGCCATATAGTGACTATTTACAGATTAGCAAGGAAATGGCTAGAAAGATGTATTCTGATATGGTCACTCTCCAAGTTATGGACACTGTACTCTATGAAGTGCAAAGGCAAGGAAGAATCTCCTTCTATCTCACTTCAATGGGAGAAGAAGCAATTAACGTTGCATCTGCAGCTGCACTTGCTGCTGATGACATTATATTGCCTCAGTACCGGGAGGCCGGTGTTCTACTATGGCGTGGTTTTACGCTGCAAGAGTTTGCCAACCAAGTGTTTGGAAATATTGCTGATTATGGAAAAGGCAGGCAGATGCCTATACACTATGGGTCTAACAAGCACAATTACTTCACCGTTTCCTCACCCATTGCAACACAACTTTCTCAAGCAGTGGGCGCAGCCTATTCTCTTAAAATGGATAACAAGGATGCATGCGTAGTCACTTATTTCGGGGATGGAGGCAGCAGTGAGGGAGACTTCCATGCTGCACTAAATTTTGCAGCAGTGATGGAGGCCCCTGTGATTTTTATCTGTCGCAACAATGGATGGGCCATTAGTACTCCCATACAAGAACAATTTCGAAGCGATGGTTTGGTGGTTAAAGGTCAAGCTTATGGTATCAGAAGCATAAGGATAGATGGGAATGATGCTCTCGCTGTTTATAGTGCAGTTCGTACTGCTCGTGAAATGGCTATAAGTGAAAAGAGACCAATTTTAATTGAGGCACTGACATATAGAGTGGGACACCACTCCACATCAGATGACTCAACCAAATACCGACCAGTTGATGAGATTGAATATTGGAAAATGGCACGAAACCCAGTAAATAGATTCAAAAGATGGGTAGAAAGGAATGATTGGTGGGATGAAAACAACGAATCAGAGCTTCGAAGCAGTGTAAAGAAGCAGTTACTGCAAGCTATTCAGGCGgcagagaaaaaacaaaagcctcCACTTGAGGACTTTTTCAATGATGTCTATGACCAATTGCCATCAAATCTTGTAGAGCAAGAGAGACAACTTAGAGAAACTATAAAGAAGCATCCCCAAGAGTACCCTTCTGATGTTCCTCTCTA 1433 0.4257 MAVWLLARSRAHQLVAKKLALLGVLKQSSCSLRSADSSSLTVPPALLGSCNNSATRFFFSRYESTKAHTQFKQQYISEDKDDQAIDFPGGRVAFTSEMRFIAESANKRVPCYRVLDDNGEPMPYSDYLQISKEMARKMYSDMVTLQVMDTVLYEVQRQGRISFYLTSMGEEAINVASAAALAADDIILPQYREAGVLLWRGFTLQEFANQVFGNIADYGKGRQMPIHYGSNKHNYFTVSSPIATQLSQAVGAAYSLKMDNKDACVVTYFGDGGSSEGDFHAALNFAAVMEAPVIFICRNNGWAISTPIQEQFRSDGLVVKGQAYGIRSIRIDGNDALAVYSAVRTAREMAISEKRPILIEALTYRVGHHSTSDDSTKYRPVDEIEYWKMARNPVNRFKRWVERNDWWDENNESELRSSVKKQLLQAIQAAEKKQKPPLEDFFNDVYDQLPSNLVEQERQLRETIKKHPQEYPSDVPL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02905 477 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 58 477 - -
Bva06g02905 477 Pfam Dehydrogenase E1 component 142 437 IPR001017 GO:0016624
Bva06g02905 477 Gene3D - 80 475 - -
Bva06g02905 477 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 109 472 IPR029061 -
Bva06g02905 477 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 58 477 - -
Bva06g02905 477 CDD TPP_E1_PDC_ADC_BCADC 138 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02905 Bva-Chr6 18139744 18143239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02905 61 314 Acyl Lipid Metabolism Gene Families AT1G21400 71.094 8.56e-136 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02905 K00166 - gmx:100796766 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02905 06 18139744 18143239 Bva06g02905 06 18139744 18143239 ECH