Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02890 ATGGATCCTATCGGTGCCTCAGCACTAAAATTGGAGGCAAACTTCGACCCATCGTTGCTTCAGAAGCAACAGTGCGTGCCCACGATTTTCAGTTGGCCAAAAGAGTACCTAGTTGAAGCCCTGGAAGAGCTCCAAGCACCAGTTGTTGACCTCAAAGGGTTCCTCAGAGGAGACGATGACGCCACTGAACATGCTGCGAAGCTCGTAAGAGAAGCCTGCGTAGTCCACGGTTTCTTCCTAGTGATCAACCATGGCGTTGATTCACAACTCATTGATGAAGCATATCATCAAATGGACTCTTTCTTTAAGCTTCCAGTTCACGAGAAATCAAGGGTTCGCAAAACAAGCGAATCCATGTGGGGCTATTCCGGTGCCCATGCTCATCGCTTCTCCTCAAATCTACCTTGGAAGGAGGCTCTCTCTTTCCCCTATCATGACAATGCCGAGGAGCCTGTTGTCACTCACTACTTTAACTCAAACCTGGGGAAAGATTTCGAACAAACTGGAATGGTTTTTCAGAAATACTGCAGAGCTATGAAGGATTTGGGGCTGAAACTGATGGAGCTGTTGGGGATCAGCTTAGGCGTGGACAGGTTGTTTTACAGGGACTTTTTCCAAGATGGTAGTTGCATTATGAGATGCAACTATTACCCGTCTTGCCAACAGCCAAGCGTTACCCTTGGGACGGGACCACATTGTGACCCAACATCCTTAACTATACTTCACCAAGATCATGTGGGTGGTCTTGAAGTGTTTTCAAGCCAAAAGTGGCAGAAAGTTCGACCTCGTCCTGATGCCTTTGTAATTAACATTGGCCAGACCTTTACGGCACTAACAAATGGAAGATACAAGAGTTGCCTGCATAGGGCAATGGTTAACAGTTGCAAGGAGAGAAGGTCGATGACTTTCTTTCTGTGCCCAAAAGAGGACAAGGTGGTGAGACCCCCCGAGGATTTGGTGGTGAGGGAAGGGACAAGAAAGTACCCAGATTTCACATGGTCGGATTTGCTTGATTTCACACAAAAGTACTACAGAGCCGACGAAGCTACCCTGCAAAATTTCACCAAGTGGTTCCAAACTGCACCCGTTTTAACTCAACCAACAGATTCTGATGATCTTCAGTA 1124 0.4698 MDPIGASALKLEANFDPSLLQKQQCVPTIFSWPKEYLVEALEELQAPVVDLKGFLRGDDDATEHAAKLVREACVVHGFFLVINHGVDSQLIDEAYHQMDSFFKLPVHEKSRVRKTSESMWGYSGAHAHRFSSNLPWKEALSFPYHDNAEEPVVTHYFNSNLGKDFEQTGMVFQKYCRAMKDLGLKLMELLGISLGVDRLFYRDFFQDGSCIMRCNYYPSCQQPSVTLGTGPHCDPTSLTILHQDHVGGLEVFSSQKWQKVRPRPDAFVINIGQTFTALTNGRYKSCLHRAMVNSCKERRSMTFFLCPKEDKVVRPPEDLVVREGTRKYPDFTWSDLLDFTQKYYRADEATLQNFTKWFQTAPVLTQPTDSDDLQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02890 374 Pfam 2OG-Fe(II) oxygenase superfamily 210 307 IPR044861 -
Bva06g02890 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 307 IPR005123 -
Bva06g02890 374 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 363 - -
Bva06g02890 374 Gene3D - 18 339 IPR027443 -
Bva06g02890 374 PRINTS Isopenicillin N synthase signature 232 253 - -
Bva06g02890 374 PRINTS Isopenicillin N synthase signature 69 86 - -
Bva06g02890 374 PRINTS Isopenicillin N synthase signature 267 293 - -
Bva06g02890 374 Pfam non-haem dioxygenase in morphine synthesis N-terminal 47 158 IPR026992 -
Bva06g02890 374 PANTHER GIBBERELLIN 20-OXIDASE 19 363 - -
Bva06g02890 374 SUPERFAMILY Clavaminate synthase-like 19 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02890 Bva-Chr6 18059925 18061258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02890 26 345 Glycosyltransferase AT5G59530 28.228 4.33e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02890 K05282 - gmx:100776707 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02890 06 18059925 18061258 Bva06g02890 06 18059925 18061258 ECH