Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02889 atggagGCTTATTTGGAAGAAATGAGACAGGAACAGAGAGCTCGTGGCCCAGCCACAATACTTGCCATTGGCACTGCAAATCCCCCAGACTGTATTTACCAATCTGAGTTCGCTGATTACTACTTCCGTGTCACAAATAGCGATCACTTGACTAACCTCAAAGCCAAGTTAAAGCGTATATGCGAGAAGTCGATGATCAGAAAACGTCACATATTCTTGACTGAAGAAATGCTGAAGGAAAATCCCAACATGAGCACTCAAGCTGATCCATCTCTAAATATACGTCAGGATATACTGATAGAGGAAGTGCCAAAGCTTGGGGAGAAAGCTGCATCAAAAGCTATCAAGGAATGGGGCCGCCCCAAATCAGATATCACTCATCTCATATTCTGCTCCATTTCAGGTGTAGACGCGCCTGGTGCTGACTACAAACTCGTCAATCTCTTAGGTCTCAACCCCTCTGTTAAACGCTTTATGTTGTATCATCAAGGTTGCTTCGCCGGTGGCACCGTGCTCCGTCTTGCAAAAGATCTCGCAGAGAACAATGCTGGTGCTCGTGTTCTCGTTGTTTGCTCTGAGATGACCCTCGTTTTATTCCGTGGACCCAGTGAAACCCAGATGGACAACATGGTAGGCCAAGCAATCTTTGCTGATGGCGCTTCAGCGGCTATAATTGGTGCCAGTCCTCTTCCAATCGAGCGACCATTGTTCCATATGGTGTCTGCGTCGCAATCGATCCTACCTAACTCAGAAGGTGCAATTACAGGACACTTGCGTGAAGAGGGACTCACTTTCACCTTGAAAGGAAACGTGCCCCAAGTAATTTCAGACAACATAGAGAAAAGTCTTGAAGAAACCTTTAACCCACTTGGGATCAGTGACTGGAACTCAATTTTTTGGGTAACACATCCTGGAGGCCCGGCAATCTTGAACCAGATTGAAACAACACTTGGGTTAAAGGAAGAGAAACTAAGAACAAGTAAACATGTGTTGAGCGAGTATGGGAACATGTCGAGTGCATGTGTGTTGTTTGTGTTGGATGAGATGAGAAGAAGGTCTATGGAGGAAGGAAAGGCTACCACAGGGGAAGGGCTTACGTGGGGTGTGCTCTATGGATTTGGACCAGGTATGACCATGGAAACCATTGTCCTGCATAGTGTTCCCATTCAGCACAACTA 1178 0.4601 MEAYLEEMRQEQRARGPATILAIGTANPPDCIYQSEFADYYFRVTNSDHLTNLKAKLKRICEKSMIRKRHIFLTEEMLKENPNMSTQADPSLNIRQDILIEEVPKLGEKAASKAIKEWGRPKSDITHLIFCSISGVDAPGADYKLVNLLGLNPSVKRFMLYHQGCFAGGTVLRLAKDLAENNAGARVLVVCSEMTLVLFRGPSETQMDNMVGQAIFADGASAAIIGASPLPIERPLFHMVSASQSILPNSEGAITGHLREEGLTFTLKGNVPQVISDNIEKSLEETFNPLGISDWNSIFWVTHPGGPAILNQIETTLGLKEEKLRTSKHVLSEYGNMSSACVLFVLDEMRRRSMEEGKATTGEGLTWGVLYGFGPGMTMETIVLHSVPIQHN 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02889 392 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 4 389 IPR011141 GO:0009058|GO:0016747
Bva06g02889 392 Pfam Chalcone and stilbene synthases, N-terminal domain 6 229 IPR001099 -
Bva06g02889 392 ProSitePatterns Chalcone and stilbene synthases active site. 157 173 IPR018088 GO:0009058|GO:0016746
Bva06g02889 392 Gene3D - 1 235 IPR016039 GO:0016746
Bva06g02889 392 SUPERFAMILY Thiolase-like 6 231 IPR016039 GO:0016746
Bva06g02889 392 CDD CHS_like 17 384 - -
Bva06g02889 392 SUPERFAMILY Thiolase-like 235 387 IPR016039 GO:0016746
Bva06g02889 392 Pfam Chalcone and stilbene synthases, C-terminal domain 239 388 IPR012328 -
Bva06g02889 392 Gene3D - 236 391 IPR016039 GO:0016746
Bva06g02889 392 PIRSF PKS_III 3 389 IPR011141 GO:0009058|GO:0016747
Bva06g02889 392 PANTHER CHALCONE SYNTHASE 2 4 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02889 Bva-Chr6 18043109 18044981 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02889 K00660 - nnu:104591893 567.385