Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02883 ATGTCTTCCCTGACCCCCATTGACTTGCAACGTATCTTCGAGAAGCTTGACATCAATGGCGATGGCTCTGTTAGCCTCGAGGAGCTAAATTGGCTGCTCGAAAAGATGGGTTTCCGGTTCGGCCTCGAGGAGCTCGAATCCATTGTTGGAAAGGAGAGTCTTGACTTGGATGAGTTTGTGTTCTTCTACAACTCCATATTAAAGGAGAACAGCCGTGGGGAGAGCGAAGGAGGCGAAGACGATCACGATGTTGAAGATGTGGAAACTGACCTTCTTAAGGCCTTCAGAGTATTTGACTTGGATGGCGACGGATTCATCACGAGCCAAGAGCTGGAGTCTGTTCTGAGGAAGCTGGGTTATTGGGACGACAACAACGGCAAAGATTGCAGAAGCATGATCTGTGTCTACGATACCAATTTGGATGGACGGCTTGATTTCGAAGAATTCAAGAATATGATGTTGCTTACCActtctta 476 0.4685 MSSLTPIDLQRIFEKLDINGDGSVSLEELNWLLEKMGFRFGLEELESIVGKESLDLDEFVFFYNSILKENSRGESEGGEDDHDVEDVETDLLKAFRVFDLDGDGFITSQELESVLRKLGYWDDNNGKDCRSMICVYDTNLDGRLDFEEFKNMMLLTTS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02883 158 Gene3D - 79 157 - -
Bva06g02883 158 Pfam EF-hand domain pair 89 153 IPR002048 GO:0005509
Bva06g02883 158 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 158 - -
Bva06g02883 158 SUPERFAMILY EF-hand 8 154 IPR011992 -
Bva06g02883 158 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Bva06g02883 158 PANTHER CALCIUM-BINDING PROTEIN CML44-RELATED 1 158 - -
Bva06g02883 158 ProSiteProfiles EF-hand calcium-binding domain profile. 86 121 IPR002048 GO:0005509
Bva06g02883 158 SMART efh_1 8 36 IPR002048 GO:0005509
Bva06g02883 158 SMART efh_1 128 156 IPR002048 GO:0005509
Bva06g02883 158 SMART efh_1 90 118 IPR002048 GO:0005509
Bva06g02883 158 Pfam EF hand 9 29 IPR002048 GO:0005509
Bva06g02883 158 ProSitePatterns EF-hand calcium-binding domain. 17 29 IPR018247 -
Bva06g02883 158 CDD EFh 90 153 IPR002048 GO:0005509
Bva06g02883 158 ProSitePatterns EF-hand calcium-binding domain. 99 111 IPR018247 -
Bva06g02883 158 ProSiteProfiles EF-hand calcium-binding domain profile. 124 158 IPR002048 GO:0005509
Bva06g02883 158 Gene3D - 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02883 Bva-Chr6 18022044 18022874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02883 2 154 EF-hand Containing Proteins AT1G21550 48.077 3.30e-39 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02883 K13448 - gmx:100779760 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02883 06 18022044 18022874 Bva06g02883 06 18022044 18022874 ECH