Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02857 atgTCGATTTTCGAGTACAACGGAAGTGCCCTAGTAGCTATGGTTGGCAAGAATTGCTTTGCCATTGCCAGCGATCGGAGACTTGGTGTTCAGCTCCAGACCGTCGCCACAGATTTCCAGAGAATTTACAAGATTCATGACAAGTTATTTATTGGTCTCGCTGGTCTCGGCACCGATGCCCAGACACTGTATCAACGACTTGTGTTCCGGCACAAACTGTATCAGCTTCGTGAAGAGAGGGATATGAAGCCTGAGACCTTTGCCAGCTTAGTCTCTGCTGTTCTATACGAGAAAAGGTTTGGTCCATACTTTTGCCAGCCTGTAATTGCTGGGTTAGGTGATGAGGACAAGCCCTTCATTTGCACAATGGATTCAATTGGAGCTAAGGAGCTTGCAAAAGATTTTGTCGTAGCTGGCACAGCTTCTGAGTCTCTTTATGGTGCTTGTGAATCGATGTTTAAGCCTGACTTGGAACCAGAAGAGTTATTTGAGACAGTCTCCCAAGCACTGCTTTCATCCGTTGATAGGGACTGTTTAAGTGGCTGGGGTGGACACGTTTATCTTGTTACACCCAACGAAGTAAAGGAAAGGATCTTAAAAGGAAGGATGGATTA 614 0.456 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTVATDFQRIYKIHDKLFIGLAGLGTDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAVLYEKRFGPYFCQPVIAGLGDEDKPFICTMDSIGAKELAKDFVVAGTASESLYGACESMFKPDLEPEELFETVSQALLSSVDRDCLSGWGGHVYLVTPNEVKERILKGRMD 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02857 204 ProSitePatterns Proteasome beta-type subunits signature. 12 59 IPR016050 GO:0005839|GO:0051603
Bva06g02857 204 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 204 IPR029055 -
Bva06g02857 204 Pfam Proteasome subunit 7 188 IPR001353 GO:0005839|GO:0051603
Bva06g02857 204 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 204 IPR029055 -
Bva06g02857 204 CDD proteasome_beta_type_3 6 200 IPR033811 GO:0019774|GO:0043161
Bva06g02857 204 PANTHER PROTEASOME SUBUNIT BETA 4 198 - -
Bva06g02857 204 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 4 198 - -
Bva06g02857 204 ProSiteProfiles Proteasome beta-type subunit profile. 8 189 IPR023333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02857 Bva-Chr6 17878072 17881969 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02857 K02735 - cpap:110813588 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02857 06 17878072 17881969 Bva06g02857 06 17878072 17881969 ECH