Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02843 ATGGCGGAAAGGTTTTCGTTTCGGTTCATCTTTGTCTTCGTTTTGTCTCTCTTCACATCGTTGCCCACACAGATCTCTGCAGATGAATCTGCAGAAGGCAAAGAGTTCGTGCTCACTTTGGACCACTCTAACTTCTCCGACACTATCAGCAAGCATGATTTCATCGTCGTCGAGTTCTACGCACCTTGGTGTGGGCACTGTAAGAAGCTCGCTCCAGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGTCATGATCCTCCGATTGTTTTGGCTAAAGTTGATGCCAATGAGGAAAAGAACAGAGAAATTGCAACTGAATATGAAGTTAAGGGATTCCCAACAATTAAGATTCTGAGAAATGGAGGAAAGAATGTTCAGGAATACAAAGGACCTCGTGAGGCAGATGGTATTGTTGATCATCTTAAGAAACAAAGTGGTCCTGCATCAACCGAAATTAAGTCTGCTGATGATGCTAGTGTTTTCATTGGTGAAAATAAAGTTGTTATTGTTGGGGTTTTCCCAAAATTTTCTGGGGACGAGTTTGAGAACTTCACTGCTTTAGCGGAGAAATTGCGGTCTGACTATGACTTTGCTCACACCTTGGATGCCAAACACCTTCCACGGGGAGAATCTTCAGTGTCTGGACCCCTAGTCCGATTGTTCAAGCCATTTGATGAACTATTTGTTGATTTCAAGGATTTCCACGTGGACGCCCTAGAgaaatttattgaagaaaCTAGTGTCCCACTTGTAACGATCTTTAACAATGATCCAGATAATCACCCTTATGTTATCAAATTCTTTAACAGCCCCCATGCAAAGGCAATGTTGTTTATCAACTTCACTGTTGAAGATGCTGATTCTTTCAAGTCAAAGTACCGTGAAGCTGCTGAGCAATATAGACAAGATGCTATAAGCTTTTTGATAGGAGATCTTGAGGCTAGTCAAGGTGCCTTCCAGTATTTTGGACTTAAGGAAGACCAAGTGCCTCTGATTATCGTACAACATAATGATGGAAAGAAATTCCTTAAACCGAATTTGGAAGCTGATCACATTCCAACTTGGTTGAAGGCATACAAGGCTGGAGAAGTTGAACACTATAAGAAATCTGAACCTGTTCCTGAAGTTAACAATGAGCCTGTCAAAGTTGTAGTTGCAGACACACTTCAAGAAATTGTTTTCAACTCCGGGAAAAACGTTTTGCTGGAGTTCTATGCACCTTGGTGTGGTCATTGCAAGAAGTTGGCTCCAATATTGGATGAAGTTGCTGTCTCTTATCAAAATGATGCTGACGTTGTCATTGCAAAACTGGATGCTACTGCCAATGATATCCCAAGTGATACCTTTGATGTCCAAGGTTATCCAACACTCTACTTCCGGTCAGCAAGTGGAAAGATATCACAGTATGATGGAGGTAGGACAAAGGAAGACATCATAGATTTCATCGAGAAGAACCGGGATAAAACCGGTCAGCAAGAACAAGCAACTCCTCAGCAAGAAGGAGCAAAAGATGAGCTTTG 1520 0.4158 MAERFSFRFIFVFVLSLFTSLPTQISADESAEGKEFVLTLDHSNFSDTISKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPIVLAKVDANEEKNREIATEYEVKGFPTIKILRNGGKNVQEYKGPREADGIVDHLKKQSGPASTEIKSADDASVFIGENKVVIVGVFPKFSGDEFENFTALAEKLRSDYDFAHTLDAKHLPRGESSVSGPLVRLFKPFDELFVDFKDFHVDALEKFIEETSVPLVTIFNNDPDNHPYVIKFFNSPHAKAMLFINFTVEDADSFKSKYREAAEQYRQDAISFLIGDLEASQGAFQYFGLKEDQVPLIIVQHNDGKKFLKPNLEADHIPTWLKAYKAGEVEHYKKSEPVPEVNNEPVKVVVADTLQEIVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKLDATANDIPSDTFDVQGYPTLYFRSASGKISQYDGGRTKEDIIDFIEKNRDKTGQQEQATPQQEGAKDEL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02843 506 Pfam Thioredoxin 37 143 IPR013766 -
Bva06g02843 506 Pfam Thioredoxin 381 484 IPR013766 -
Bva06g02843 506 Gene3D Glutaredoxin 145 249 - -
Bva06g02843 506 PANTHER PROTEIN DISULFIDE ISOMERASE 11 495 - -
Bva06g02843 506 ProSitePatterns Thioredoxin family active site. 56 74 IPR017937 -
Bva06g02843 506 ProSiteProfiles Thioredoxin domain profile. 367 487 IPR013766 -
Bva06g02843 506 SUPERFAMILY Thioredoxin-like 150 249 IPR036249 -
Bva06g02843 506 SUPERFAMILY Thioredoxin-like 347 488 IPR036249 -
Bva06g02843 506 CDD PDI_b_family 149 245 - -
Bva06g02843 506 TIGRFAM ER_PDI_fam: protein disulfide isomerase 37 506 IPR005792 GO:0003756
Bva06g02843 506 ProSitePatterns Thioredoxin family active site. 401 419 IPR017937 -
Bva06g02843 506 CDD PDI_a_PDI_a'_C 380 482 - -
Bva06g02843 506 Gene3D Glutaredoxin 27 144 - -
Bva06g02843 506 MobiDBLite consensus disorder prediction 484 506 - -
Bva06g02843 506 Gene3D Glutaredoxin 375 489 - -
Bva06g02843 506 CDD PDI_a_family 38 141 - -
Bva06g02843 506 PRINTS Thioredoxin family signature 55 63 - -
Bva06g02843 506 PRINTS Thioredoxin family signature 108 119 - -
Bva06g02843 506 PRINTS Thioredoxin family signature 63 72 - -
Bva06g02843 506 PANTHER PROTEIN DISULFIDE-ISOMERASE 11 495 - -
Bva06g02843 506 TIGRFAM pdi_dom: protein disulfide-isomerase domain 41 144 IPR005788 GO:0003756
Bva06g02843 506 TIGRFAM pdi_dom: protein disulfide-isomerase domain 385 485 IPR005788 GO:0003756
Bva06g02843 506 Pfam Thioredoxin-like domain 173 356 - -
Bva06g02843 506 SUPERFAMILY Thioredoxin-like 247 378 IPR036249 -
Bva06g02843 506 CDD PDI_b'_family 263 360 - -
Bva06g02843 506 Gene3D Glutaredoxin 250 374 - -
Bva06g02843 506 ProSiteProfiles Thioredoxin domain profile. 15 146 IPR013766 -
Bva06g02843 506 SUPERFAMILY Thioredoxin-like 37 147 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02843 Bva-Chr6 17817964 17822233 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02843 K09580 - gmx:100788687 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02843 06 17817964 17822233 Bva06g02843 06 17817964 17822233 ECH