Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02840 atgaaaattcagaaGTCTTTGCTTAACTTGGggattctattcttttttatccttCTGGTTCCGATAGACTTGATGATCTCACTCGCCGAGCAGATAACTTCCGCTTCTTACGACGGCGTCTTCTTCGGCGCCGACCGGAGCTGTTACAAGCCGGATTCATCGTCTTGGGTAGCTTGCAAAAACCAGACGCGCCGAGGGACAGCGGAGTTAAGCTGTGACGTATGGAGCAAGGCGTGCTCGGAGGCGGTTCTGAGTATAGCGCGGCGCCCGGAGATGGCAAAGTGGTTGAAAAGCGTGCGGAGGAGGATCCATGAGAATCCCGAGCTGGCTTTTGAGGAATTCGAGACAAGCCGTTTGATAAGAGAGGAGTTGGATCACATGGAGGTTAGTTACAGTCACCCTTACGCTAAGACCGGCATCCGGGCATGGATCGGGACCGGGGGTCCGCCTTTTGTTGCAATCCGAGCTGACATGGATGCACTCCCTATTCAGGAAGCAGTGGAATGGGAGTACAAATCTAAAGTTGATGGGAAAATGCATGCTTGTGGCCACGACGCACATGTGGCCATGCTTGTTGGTGCTGCCAAGATCTTGAAGAGCCGTGAACATTTATTAAAGGGAACTGTAATTCTGCTATTCCAGCCAGCAGAGGAGGCTGGTAATGGTGCGAAGAGAATGATACAAGAAGGTGCATTGGAGGACGTAGAGGCAATTTTTGCAGTTCATGTATCCCACCAATATGCAACTGGCATTATCGGGTCGAGGCCTGGACCTTTGCTAGCTGGGTGTGGTTTTTTCAGAGCTGTGATTAGTGCAAAAAATGCTCGTGTTGGAAACAAACACAACTCTGTTGATCCTGTTTTGGCAGCTTCTGCTGCAATAATAAGCTTACAGGGCATTGTGTCTCGTGAAGCCAATCCATTGGACTCACAGGTTGTCTCCGTGACGTCTTTCAAAGGAGGCAACGAACTCGACACGATACCGGACACAGTGGTCCTTGGTGGAACCTTCAGGGCTTTCTCTAATACAAGCTTTTACCAGATTCTTGAAAGAATAGAGCAGGTAATCGTGGAACAGGCCAGTGTGTACAGATGTTCTGCAGTGGTTGACTTCTTTGAAAAAGAATACACCATTTACCCTCCCACAGTAAATGATGATGGCATGTATGAACATGTAAAGAAGGTAGCAATCGATTTGGTGGGTCCAAATAATTTCAGGGTAGTCCCACCTATGATGGGTGCCGAAGATTTCTCGTTTTACTCACAGGTGGTTCCTGCAGCTTTCTTCTACATAGGGATAAAGAATGAGACATTGGGGTCCTTTCACACAGGACATTCACCTTATTTCATGATTGACGAAGAGAGTCTTCCTACAGGCGCCGCCATTCATGCCACCATTGCAGAGAGGTACCTCATTGAACATGGCTA 1427 0.4751 MKIQKSLLNLGILFFFILLVPIDLMISLAEQITSASYDGVFFGADRSCYKPDSSSWVACKNQTRRGTAELSCDVWSKACSEAVLSIARRPEMAKWLKSVRRRIHENPELAFEEFETSRLIREELDHMEVSYSHPYAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEYKSKVDGKMHACGHDAHVAMLVGAAKILKSREHLLKGTVILLFQPAEEAGNGAKRMIQEGALEDVEAIFAVHVSHQYATGIIGSRPGPLLAGCGFFRAVISAKNARVGNKHNSVDPVLAASAAIISLQGIVSREANPLDSQVVSVTSFKGGNELDTIPDTVVLGGTFRAFSNTSFYQILERIEQVIVEQASVYRCSAVVDFFEKEYTIYPPTVNDDGMYEHVKKVAIDLVGPNNFRVVPPMMGAEDFSFYSQVVPAAFFYIGIKNETLGSFHTGHSPYFMIDEESLPTGAAIHATIAERYLIEHG 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02840 475 TIGRFAM amidohydrolases: amidohydrolase 98 459 IPR017439 GO:0016787
Bva06g02840 475 Gene3D - 261 380 - -
Bva06g02840 475 Pfam Peptidase dimerisation domain 267 360 IPR011650 -
Bva06g02840 475 SUPERFAMILY Bacterial exopeptidase dimerisation domain 262 370 IPR036264 -
Bva06g02840 475 Pfam Peptidase family M20/M25/M40 153 468 IPR002933 GO:0016787
Bva06g02840 475 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 42 474 - -
Bva06g02840 475 CDD M20_IAA_Hyd 96 471 IPR044757 GO:0009850|GO:0016787
Bva06g02840 475 PANTHER PEPTIDASE M20 FAMILY MEMBER 42 474 IPR017439 GO:0016787
Bva06g02840 475 SUPERFAMILY Zn-dependent exopeptidases 90 473 - -
Bva06g02840 475 Gene3D Zn peptidases 98 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02840 Bva-Chr6 17798755 17803564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02840 K21604 - gmx:100785666 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02840 06 17798755 17803564 Bva06g02840 06 17798755 17803564 ECH