Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02838 ATGAACGCCTTCGCCATACCTACTGCTACAGCTCTCTCTTTACCCCACTCTATTTTCAAATCACCTAGGCTCGAAGTCAGAAAGGGTGCTAAAGGAAAATTTCGAGTGTTTGCTGTATTTGGAGGTGGGGTCGACAAGAAGAATTTATGGGGTGCGCTCTTTGACGTGGAGGATCCAAGATCTAAAGTCCCCCAGTATAAAGGGAAGTTTCTGGATGCATGCCAAGCCCTAGAAGTGGCTAGATACGATATTCAGTACTGTGATTGGCGAGCTCGGCAAGATGTGCTTACCATCATGCTCCTCCACGAAAAGGTGGTGGAAGTTCTTAATCCTCTAGCTCGTGATTATAAGTCAATTGGCACCATGAAAAAGGAGCTTGCAGAGTTACAGGAAGAATTATCACAAGCACACAGACAGGTACATATATCTGAAGCAAGGGTTTCCGCCACATTGGATAAACTAGCTTACATGGAAGAATTGGTGAATGATAGGCTGCTTCAAGACAGAAGCGTGACTGAAGTTGACCAGACATCCCCTCCTCCCAGTACTTCTACACAATCTGTGGATGTTGGAAAGAGAAGGATTCCAAGGAAAAACTTGGATGTATCAGGTCCAGTTCAGCCCTATCCTCCGCgtttaaagaatttttggtACCCTGTCGCTTTCTCAACTGATCTAAATGATGATACAATGaTCCCAATCGAGTGTTTTGAGGAACCATGGGTTATATTTAGAGGGAAAGATGGAAAACCTGGATGTGTTCAGAATACCTGTGCACACAGAGCATGCCCTCTGCATCTTGGTTCTGTAAATGAGGGTCGCATCCATTGCCCCTACCACGGTTGGGAATATACGACTGATGGAAAATGTGAGAAAATGCCATCTACTCGACTGCTGAGTGTAAGGATAAAGTCGTTGCCATGTTTTGAACAAGAGGGGATGATTTGGATTTGGCCTGGCAATGATCCTCCAGCTGCCACTATTCCATCTTTACTTCCTCCTTCTGGGTTTGAGGTTCATGCTCAGATTGTCATGGAACTTCCAGTAGAACATGGGTTACTTTTAGACAACCTTTTGGATCTTGCACATGCCCCTTTTACTCACACTTCTACTTTTGCCAAGGGATGGAGTGTTCCAAGCTTGGTAAAATTTTTGACACCTTCATCTGGCCTGCAAGGATACTGGGACCCTTATCCAATTGATATGGAATTTCGACCACCTTGCATGGTTCTATCAACCATTGGAATCTCGAAGCCGGGGAAACTGGAAGGACAAAACACCAAGCAGTGTGCCACACACCTTCACCAACTTCATGTCTGCTTACCgtcatcaaaacaaaaaacaagatTACTATACAGAATGTCACTGGATTTTGCTCCTGTTCTTAAGCACATCCCTTTCATGCACCATCTGTGGAGGCATTTTGCACAACAGGTTCTAAATGAGGATCTACGGCTGGTACTGGGCCAGCAAGAGCGAATGATCAATGGCGCGAATGTCTGGAATGCCCCTGTATCCTATGACAAGCTTGGAGTAAGATACAGATTGTGGAGAGATGCGTTGGAGCGAGGAGTCAAGCAACTACCCTTTCAGCAAATAGAAAGGAATGAAGAAGATTA 1619 0.4422 MNAFAIPTATALSLPHSIFKSPRLEVRKGAKGKFRVFAVFGGGVDKKNLWGALFDVEDPRSKVPQYKGKFLDACQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEELSQAHRQVHISEARVSATLDKLAYMEELVNDRLLQDRSVTEVDQTSPPPSTSTQSVDVGKRRIPRKNLDVSGPVQPYPPRLKNFWYPVAFSTDLNDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIHCPYHGWEYTTDGKCEKMPSTRLLSVRIKSLPCFEQEGMIWIWPGNDPPAATIPSLLPPSGFEVHAQIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTKQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPVLKHIPFMHHLWRHFAQQVLNEDLRLVLGQQERMINGANVWNAPVSYDKLGVRYRLWRDALERGVKQLPFQQIERNEED 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02838 539 Pfam Pheophorbide a oxygenase 404 498 IPR013626 GO:0010277
Bva06g02838 539 Gene3D - 339 527 - -
Bva06g02838 539 Pfam Rieske [2Fe-2S] domain 217 298 IPR017941 GO:0051537
Bva06g02838 539 Gene3D - 211 334 IPR036922 GO:0051537
Bva06g02838 539 Pfam Vanillate O-demethylase oxygenase C-terminal domain 350 374 IPR044043 GO:0016491
Bva06g02838 539 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 217 317 IPR017941 GO:0051537
Bva06g02838 539 SUPERFAMILY Bet v1-like 313 525 - -
Bva06g02838 539 Coils Coil 119 146 - -
Bva06g02838 539 MobiDBLite consensus disorder prediction 171 190 - -
Bva06g02838 539 SUPERFAMILY ISP domain 213 322 IPR036922 GO:0051537
Bva06g02838 539 MobiDBLite consensus disorder prediction 170 194 - -
Bva06g02838 539 CDD Rieske_RO_Alpha_Cao 200 328 - -
Bva06g02838 539 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 258 280 IPR015881 GO:0005506|GO:0051537
Bva06g02838 539 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 72 531 - -
Bva06g02838 539 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 72 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02838 Bva-Chr6 17786189 17790465 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02838 K13600 - gmx:100806298 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02838 06 17786189 17790465 Bva06g02838 06 17786189 17790465 ECH