LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva06g02836	atggagaaaaagagatgGTTATGGAAGCGGAAATCTTCTGATAAGAGCCCTGGCGAAACTGAAAGTTCAGGATCTGTAGCGTCTCATTCTGAGAGATGTTCAGATGAGCAGGAGGCGTTGAGGGAATCTCCCAACAGAAGTAATCAGTCACCCGATGTCACCTCAAAAGCAGTGGCTTGCACTGAAGAGGCTAATCATAGTCCATCTGCCGGTGCAGAATCACCTGAAGTCACTTCAAAGGCTGTAACTTCACCAGACAATGTAAATGATGATTCGCCAGAGGAAGAAGGCAACAATGCAAAGAATGATATTGATAGTGTAAAGGAAGTTGATGTGAATGATGGTTTGAGGAATTTGTCTGAGAAACTATCTGCAGCACTTGTGAATGTTAGTGCCAAAGACGACTTGGTTAAGCAGCATGCCAAAGTTGCTGAAGAAGCAATTGCAGGCTGGGAAAAGGCTGAAAATGAGGTAGCAGTTTTAAAGAAGCAAATTGAGGCAGCGAATCTAAGGAATTCAACTCTGGAAGATCGAGTTTCCCATCTTGATGGTGCACTGAAGGAGTGTGTTAGGCAGCTAAGACAGACAAGGGACGAGCAGGAAAAAAATATCCATGATGCTGTAGTAAAGCAAACTTATGACTTGGAAGTAGCCAAACTTAAACTTGAGAACCAGCTGCTTGAGCTCCAGAGCAAACTTGATGCTGCTGATTCCAGATCTCCTGATCTTGATTTGTACCAAAAGGTTGAACGTTTGCAGAAAGAGAACACGACTCTCAAGCATAAGCTTCAAGCTCAATCAGAAGAGCTGGAAATCATGACCATTGAGAGGGACTTGAGTACCCAAGCGGCTGAGACAGCTAGCAAGCAACATTTAGAAACCATTAAGAAAGTGACCAAGCTTGAGGCTGAGTGTCGGAGACTGAAGACATTGTCTTGTAGAGCATCCTTAGTTAATGATCAAAAGACGGTTTCTGCATCCTCATTTTCTGTGGAATCGCTCACAGATAGTCTATCAGACAGTGGGGAGCGGTTCAATGCAGTGGACATAGATACCAATAAGAGTGGCTCAGAACCAAACAAAAGCGACCCAACTTGCTCTGATTCATGGGCATCTGCACTTATTGCTGAGCTTGATCAGTTCAAGAATGAAAAATCTAGACAACCCCCGGCCTCTTGTGTTAAAATTGATCTCATGGATGATTTTCTTGAAATGGAGCGACTCGCTGCATTGACTGAGACTAAGAATGAAAGCATTAACCAGGAGTTAGTTGAAACCAATCAATGCGTCAACGAAGAAAACTCCCTCATAGCGGAGTTGAACTTCATGAGTCACCAAATGTCTGAATTAAAAGACAGGTTAGAGAAGGTAGAAGCAGAGAAAGCTGAACTGGAGATGGCTTTGGTGAAAAGTGAAGATTGTATTCAGGTGTCACAACTTAAACTGAGGGCGGCAGAAATCAAAATGCACGAGTTGCAAAGAGAACGAGACGTGGTCAACAAATTAAAGCAAATGATGGAAAATCAACTCAAGAGCATGGAGGCAGAGGCTGAGACAATATCAGCAAAGTTTGACTCGTTAGAATCAGAGGTTGATAAGGAGAAGGCTTTGTCAGCTGAAATTGCAATCAAGTACGAGGAATTGGAGCAAGAGCTAGAAAGCAAACGGCAGCAAGAGATACTGAGGTCAACAGCAAGTTCATATAGCGAAATGAAGATAAAGCAGGAGGACCTAGCACTAGCTGCGGGAAAGCTTGCTGAGTGCCAGAAAACGATAGCTTCACTGGGGAATCAGTTGCAGTCGCTAGCAACACTAGAAGATTTCCTGATAGACACTGCAAGTATACCAGGATTCTCTGCAAGTCCATCACTTGTTGCTCGAACTGGTGGAGATACATGGAAGTTGCATTCTAATGATAcatttttaccaaaaagagATTCGGCTTCTTCAAGCACTGCTGATGGCAGCATTGCTCCATCAGcaaacaaaaaggaagaaaattcaCCGCCTTCTTCAACTTTGTCATCTGCCTTGCCGCCAAATCATGTCAGCTCCGAGAAGAGTAGAAATGGCTTTGCAAAATTTTTCTCTCGAACTAAGAGTGGGATACGGCTAGAAATTTA	2123	0.4253	MEKKRWLWKRKSSDKSPGETESSGSVASHSERCSDEQEALRESPNRSNQSPDVTSKAVACTEEANHSPSAGAESPEVTSKAVTSPDNVNDDSPEEEGNNAKNDIDSVKEVDVNDGLRNLSEKLSAALVNVSAKDDLVKQHAKVAEEAIAGWEKAENEVAVLKKQIEAANLRNSTLEDRVSHLDGALKECVRQLRQTRDEQEKNIHDAVVKQTYDLEVAKLKLENQLLELQSKLDAADSRSPDLDLYQKVERLQKENTTLKHKLQAQSEELEIMTIERDLSTQAAETASKQHLETIKKVTKLEAECRRLKTLSCRASLVNDQKTVSASSFSVESLTDSLSDSGERFNAVDIDTNKSGSEPNKSDPTCSDSWASALIAELDQFKNEKSRQPPASCVKIDLMDDFLEMERLAALTETKNESINQELVETNQCVNEENSLIAELNFMSHQMSELKDRLEKVEAEKAELEMALVKSEDCIQVSQLKLRAAEIKMHELQRERDVVNKLKQMMENQLKSMEAEAETISAKFDSLESEVDKEKALSAEIAIKYEELEQELESKRQQEILRSTASSYSEMKIKQEDLALAAGKLAECQKTIASLGNQLQSLATLEDFLIDTASIPGFSASPSLVARTGGDTWKLHSNDTFLPKRDSASSSTADGSIAPSANKKEENSPPSSTLSSALPPNHVSSEKSRNGFAKFFSRTKSGIRLEI	707

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva06g02836	707	MobiDBLite	consensus disorder prediction	43	88	-	-
	Bva06g02836	707	MobiDBLite	consensus disorder prediction	94	109	-	-
	Bva06g02836	707	MobiDBLite	consensus disorder prediction	345	366	-	-
	Bva06g02836	707	Coils	Coil	190	239	-	-
	Bva06g02836	707	MobiDBLite	consensus disorder prediction	1	109	-	-
	Bva06g02836	707	Coils	Coil	151	178	-	-
	Bva06g02836	707	MobiDBLite	consensus disorder prediction	637	690	-	-
	Bva06g02836	707	Coils	Coil	440	558	-	-
	Bva06g02836	707	PANTHER	FILAMENT-LIKE PLANT PROTEIN 4	499	706	-	-
	Bva06g02836	707	PANTHER	FILAMENT-LIKE PLANT PROTEIN 1-RELATED	499	706	-	-
	Bva06g02836	707	Coils	Coil	249	269	-	-
	Bva06g02836	707	PANTHER	FILAMENT-LIKE PLANT PROTEIN 4	1	503	-	-
	Bva06g02836	707	Pfam	Filament-like plant protein, long coiled-coil	364	429	IPR008587	-
	Bva06g02836	707	Pfam	Filament-like plant protein, long coiled-coil	444	604	IPR008587	-
	Bva06g02836	707	Pfam	Filament-like plant protein, long coiled-coil	133	238	IPR008587	-
	Bva06g02836	707	Pfam	Filament-like plant protein, long coiled-coil	245	311	IPR008587	-
	Bva06g02836	707	MobiDBLite	consensus disorder prediction	1	17	-	-
	Bva06g02836	707	PANTHER	FILAMENT-LIKE PLANT PROTEIN 1-RELATED	1	503	-	-
	Bva06g02836	707	MobiDBLite	consensus disorder prediction	642	690	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva06g02836	Bva-Chr6	17778015	17782559	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva06g02836	-		-	aprc:113852503	839.721

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva06g02836	06	17778015	17782559	Bva06g02836	06	17778015	17782559	ECH