Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02800 ATGGCTTCTGAGAAGATTGAGACTGTGATTGCAGGGAACTACTTGGAAATGGAcggggaagaagaagagtcCAAATCTACTCGGAGCAAAATATCCAAGTTGTTCTGGCATGGTGGCTCTGTATATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTTCTGACATTACCATATTCGTTTTCACAACTGGGGATGCTATCTGGGATTCTCTTTCAGCTCTTTTATGGACTCATGGGAAGCTGGACTGCTTATCTTATCAGTGTCCTTTATGTTGAGTACAGAACcagaaaggagagagaaaaggtTGATTTCAGGAACCATGTAATCCAGTGGTTTGAAGTTCTCGATGGACTTTTAGGAAAACATTGGAGGAACATAGGCCTTTTTTTCAACTGTACTTTCCTTCTGTTTGGATCTGTTATTCAACTGATTGCTTGTGCAAGTAATATATACTACATAAACGACAACCTGGACAAAAGAACTTGGACCTACATATTTGGCGCCTGCTGTGCGACAACAGTCTTTATCCCTTCTTTCCACAATTACAGAATTTGGTCATTCTTGGGTCTCATGATGACTAGCTACACTGCATGGTATCTGACCATAGCTTCCCTTATCCATGGGCAGGTTGAGGGGGTGAAGCATTCAGGCCCAGCCAAACTGGTTCTATACTTCACTGGAGCTACCAACATTCTCTACACTTTTGGTGGACATGCTGTTACAGTGGAAATCATGCATGCAATGTGGAAGCCACAGAAGTTCAAGTTGATATATCTGTTGGCAACATTATATGTGCTGACCCTAACTTTGCCATCAGCAGCTGCTGTTTATTGGGCATTTGGGGACTTACTGCTTACTCATGCAAATGCCATCTCTTTGCTCCCAAGGACAGGATTCAGGGACACTGCTGTCATTCTCATGCTCATTCACCAGTTCATAACATTTGGATTTGCTTGTACTCCTCTGTACTTTGTTTGGGAGAAATTCATCAGGGTACATGAAACCAAGAGCTTGTTTAAAAGGGCATTGGCTAGACTTCCTGTAGTGGTACCAATATGGTTTCTGGCAATCGTATTCCCTTTCTTTGGGCCCATTAACTCAACAGTTGGATCTCTGCTAGTCAGCTTCACTGTTTACATAATTCCTGCATTGGCACACATGGTCACCTTTGCTTCAGCACCAGCTAGGGAGAATGCTGTGGAGAGACCACCATCATTTCTGGGAGGCTGGGCAGGATTATATTGCACGAATTCCTTTGTGGTGGTATGGGTTTTGGTTGTGGGATTTGGTTTGGGAGGATGGGCAAGCATGATcaatttcataaaacaaaTTGACACTTTTGGTCTATTTGCCAAGTGTTACCAGTGTCCACCTCACAAACCTTA 1397 0.4173 MASEKIETVIAGNYLEMDGEEEESKSTRSKISKLFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLMMTSYTAWYLTIASLIHGQVEGVKHSGPAKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKLIYLLATLYVLTLTLPSAAAVYWAFGDLLLTHANAISLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIRVHETKSLFKRALARLPVVVPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHMVTFASAPARENAVERPPSFLGGWAGLYCTNSFVVVWVLVVGFGLGGWASMINFIKQIDTFGLFAKCYQCPPHKP 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02800 465 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 3 3 460 - -
Bva06g02800 465 Pfam Transmembrane amino acid transporter protein 37 429 IPR013057 -
Bva06g02800 465 PANTHER OS05G0424000 PROTEIN-RELATED 3 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02800 Bva-Chr6 17580052 17582211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02800 1 465 Organic Solute Cotransporters AT1G77690 87.021 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02800 K13946 - gmx:100815243 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02800 06 17580052 17582211 Bva06g02800 06 17580052 17582211 ECH