Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02798 ATGGCGGGTGGTGGAAAGGTCTCCTTCAAAGTCACCCTCACCTCCGATCCCAAGCTGCCCTTCAAAGTGTTCAGCGTTCCTGAGGCTGCACCTTTCACGGCCGTTCTCAAATTTGCAGCCGAAGAATTCAAAGTGCCTCCCCAGACCAGCGCAATTATCACTAACGATGGCGTTGGGATCAATCCTCAGCAGAGTGCAGGTAATGTCTTTCTTAAGCATGGTTCGGAATTGCGCTTGATTCCAAGGGATAGGGTTGGTGCCACAGAAATCTG 272 0.5147 MAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGATEI 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02798 90 Pfam Ubiquitin fold modifier 1 protein 6 80 IPR005375 GO:0071569
Bva06g02798 90 PANTHER UBIQUITIN-FOLD MODIFIER 1 3 89 IPR005375 GO:0071569
Bva06g02798 90 SUPERFAMILY Ubiquitin-like 2 86 IPR029071 -
Bva06g02798 90 PIRSF Ufm1 1 88 IPR005375 GO:0071569
Bva06g02798 90 CDD Ubl_UFM1 7 81 - -
Bva06g02798 90 Gene3D - 4 87 - -
Bva06g02798 90 PANTHER UBIQUITIN-FOLD MODIFIER 1 3 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02798 Bva-Chr6 17572997 17575762 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02798 K12162 - ncol:116246146 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02798 06 17572997 17575762 Bva06g02798 06 17572997 17575762 ECH