Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02793 ATGGCGTCTTCAGCTGTGGACGACAATTCATCTTCTACGCTGGTTTTATGCGGAAAGTCAGTGACAGAAAATGAAATCGCTAAAGCTATTAAGAGCAATAACGCTTTAAAGCTTCCTAACAATGGCGAATTATCGATTCTTTTGCGATCGGAATTGGAGAAACCCATGACAGAAGAATCCTTTGAAATTGACTTGTTCCTGAGTTCTCTTTCCACGGATAAGTTCGGCAGGTTACTAATTTGGTCTCCACGGCTGTCTTCAACTCATGATGTGGTTTCCCACAACTTTTGTGAGCTTCCCGTTGGTACAGTGTGTGTTGCTGATGTTCAGACCAAGGGAAGAGGCCggtcaaaaaatatttgggaGTCTCCATTAGGTTGCCTCCTATTCTCTTTTACTCTTCAAATGGACGATGGGCGAGTAGTTCCTTTTGTACAGTATGTAGTTTCCCTGGCTATGACAGAGGCAATTAAAGTTATCTGTGATAAAAAAGGCTTGCCATGTGTTGATGTTAAAATTAAGTGGCCAAATGATCTTTACTTAAATGGCCTTAAAGTTGGAGGAATTCTATGCACCTCAACATATAGATCGAAGAAGTTTAATATCAGTGCTGGTATAGGCGTTAATATCAACAATGAGAAGCCAACAATATGCTTAAATACGGTTCTGAGAGAACTTTCGTTGGAGGCTTACCAATTCCGAAGAGAAGATGttcttgcagaattttttaacaaatttgagaaattttatgatCTGTTCGTTAATCAAGGATTTCGGACTCTAGAGGAGTTATACTATAAGACTTGGTTGCACAGTGGACAGAGAGTGATCGttcaagaaaagaatgagGACAAAGTAGTTGAACATGTGGTAACCATTCAGGGCTTGACCTCCTCAGGATACTTGTTGGCTGTTGGTGATGACAATCAAATGTGTGAGCTCCACCCTGATGGCAACAGTTTTGATTTCTTCAAAGGACTGGTCAGAAGGAAACTTGAATG 1001 0.3846 MASSAVDDNSSSTLVLCGKSVTENEIAKAIKSNNALKLPNNGELSILLRSELEKPMTEESFEIDLFLSSLSTDKFGRLLIWSPRLSSTHDVVSHNFCELPVGTVCVADVQTKGRGRSKNIWESPLGCLLFSFTLQMDDGRVVPFVQYVVSLAMTEAIKVICDKKGLPCVDVKIKWPNDLYLNGLKVGGILCTSTYRSKKFNISAGIGVNINNEKPTICLNTVLRELSLEAYQFRREDVLAEFFNKFEKFYDLFVNQGFRTLEELYYKTWLHSGQRVIVQEKNEDKVVEHVVTIQGLTSSGYLLAVGDDNQMCELHPDGNSFDFFKGLVRRKLE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02793 333 CDD BPL 79 253 IPR004408 GO:0004077|GO:0036211
Bva06g02793 333 Pfam Biotin protein ligase C terminal domain 271 326 IPR003142 GO:0036211
Bva06g02793 333 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 64 254 IPR004143 GO:0036211
Bva06g02793 333 Pfam Biotin/lipoate A/B protein ligase family 82 209 IPR004143 GO:0036211
Bva06g02793 333 SUPERFAMILY Class II aaRS and biotin synthetases 65 269 IPR045864 -
Bva06g02793 333 Gene3D Bira Bifunctional Protein; Domain 2 67 268 IPR045864 -
Bva06g02793 333 TIGRFAM birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 307 IPR004408 GO:0004077|GO:0036211
Bva06g02793 333 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 7 331 - -
Bva06g02793 333 PANTHER BIOTIN PROTEIN LIGASE 7 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02793 Bva-Chr6 17545739 17550365 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02793 K01942 - qsu:112037475 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02793 06 17545739 17550365 Bva06g02793 06 17545739 17550365 ECH