Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02792 ATGCATCCTTTTTGCTGTGTCTCCGCCATTTCCGACCAGTCTTCCCCAGTCAAACCCGCGCCTACTCCGTTCCGGGACTTCGCTATGCCTCCTCTTCCCGCCGCCACTGCTATTGCCATTAGATCCGATTCCGTTTCCCGAACCACCAACCACATCCACCACAATCGTAGTCACAGCAATTACAGCAACCACTCCAATAGCAATTGTGAGTACGGAAGGTTGAGTCAGCGGGAGCAGCAACCAATTGTGGTGGACGTGAAGATCAATGACTTGGTTGGAAATGGTATCTCGGGGATACTGTACAAGTGGGTCAATTACGGCAAAGGCTGGAGACCGAGATGGTTCGTGCTCCAAGATGGCGTGCTGTCGTACTATAAGATTCATGGACCCGATAAGATCATCGTTAATCAGGAAACTGAGAAGGGTTCCAAGCTTATTGGCGAGGAATCCATGCGAAGGATCTCTCGCAACACGAACTCTTATTCCTATCACCAGCACTTCCACCATCAACGAAAGCCATTTGGCGAAATTCATCTAAAGgTTTCATCCATTCGGGAAAGCAAATCCGATGATAAGCGCTTTTCTATATTCACTGGAACAAAGAGACTCCACTTGAGGGCTGAGACACGCGAAGATCGAGTGGCATGGATGGAGGCGTTGCAGGCAGTAAAAGATATGTTCCCCCGGATGTCCACCAGTGAACTGATGGCTCCATTGGACTATTTAACTGTGTCAACTGAGAAACTGAGGCAGCGGCTTCTGGAAGAAGGTGTTAGTGAGGCAGCCATTCAGGATAGCGAGCAAATTATGAGAAGCGAGTTTGCAGCGTTACAAAACCAACTTGTGCTGATTAAGCAGAAGCAGTTGATCCTAATGGATACACTACGGCTATTAGAGACAGAAAAGGTTGATCTGGAGAATACAGTTGTCGATGAGAGCCAAAGAAAGTTAAATGATGAAGAGGATTCCTCTAGAATAAGGCAGGACAAATTTAGTGAAGGAAGTGCAAGTGAATCTGAGGATGATAACGAGAGAAATGATGCTGCAGAGGAAGAAACCGATGATGATGACAATGCCTTTTTTGATACTCGTGACTTTCTCTCATCCAGTTCTTTTAAAAGTAATGGATCTGATTATAGGGTATCATCTTTCTCTTCAGATGGCGAAGGGCTCTATGCAGTTGAATCAGAGGAGGATGTGGATCCTTCATTTAGATCCATTGGAACCAATCATCCCTACGTTAAGCGGCGTAAGAAATTGCCTGACCCtgttgagaaagagaaaggcgTCAGTCTTTGGTCAATGATTAAGGATAATATTGGAAAGGATCTAACAAAAGTATGTCTTCCTGTTTACTTTAATGAGCCTCTCTCCTCCCTGCAAAAATGTTTTGAAGAAATGGAGTATTCGTATCTCCTGGACCGAGCTTATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGAATTCTCAATGTGGCTGCTTTTGCTGTATCTGGCTATGCTTCAACTGAAGGAAGGATTTGCAAACCATTTAATCCATTATTGGGGGAAACATATGAAGCTGTTTATGCAGATAAAGGCCTCCGATTTTTATCAGAAAAGGTTAGCCATCACCCGATGATAGTTGCTTGTCACTGCGAGGGTACAGGTTGGAAATTTTGGGGGGATAGCAACCTAAAAAGCAAATTTTGGGGCCGATCAATTCAGCTTGACCCTATGGGTATTTTGACTTTGGAATTTGATGATGGAGAAATTTTCCAGTGGAGTAAGGTTACAACATCTATATACAATCTCATACTGGGAAAGCTGTATTGTGATCACTATGGTACAATGCGTATACAGGGAAACCCTGAATACTCTTGTAAACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCACATCAGGTACATGGTATTGTTCAAGATAGGAATGGGAAAACAGTGGCTACTTTATTTGGAAAGTGGGATGAAAGCATGCATTTTGTTAATGGAGATTGTGCTGGGAAGGGCAAAGGTCATGAGTCTTTGTCAGAAGCCCGTCTACTCTGGAAACGGAGCAAGCCCCCCAAGTTTCCAACTAGATATAACCTTACTCGATTTGCCATCACATTAAATGAACTTACTCCTGGACTAAAGGAAAAGTTGCCACCTACAGATTCCAGGTTAAGACCAGACCAAAGGTATTTAGAAAATGGGGAGTATGAGATGGCGAATTCAGAGAAGTTACGGCTAGAGCAGCGGCAACGTCAGGCTCGGAAGATGCAAGAGAGTGGTTGGAGACCACGGTGGTTTGCAAGGGATAAAGCTAGCGGCTCATACCTCTATTTAGGAGGGTATTGGGAAGCCAGGGAACGAGCAAACTGGGACTCCTGCCCTGACATCTTTGGCCAAATCCCTTCCGGTCATGTTTCTGACTG 2423 0.442 MHPFCCVSAISDQSSPVKPAPTPFRDFAMPPLPAATAIAIRSDSVSRTTNHIHHNRSHSNYSNHSNSNCEYGRLSQREQQPIVVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNQETEKGSKLIGEESMRRISRNTNSYSYHQHFHHQRKPFGEIHLKVSSIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSTSELMAPLDYLTVSTEKLRQRLLEEGVSEAAIQDSEQIMRSEFAALQNQLVLIKQKQLILMDTLRLLETEKVDLENTVVDESQRKLNDEEDSSRIRQDKFSEGSASESEDDNERNDAAEEETDDDDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSDGEGLYAVESEEDVDPSFRSIGTNHPYVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDRAYEWGRRGNSLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEAVYADKGLRFLSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPMGILTLEFDDGEIFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNPEYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESMHFVNGDCAGKGKGHESLSEARLLWKRSKPPKFPTRYNLTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQESGWRPRWFARDKASGSYLYLGGYWEARERANWDSCPDIFGQIPSGHVSD 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02792 807 MobiDBLite consensus disorder prediction 314 360 - -
Bva06g02792 807 Pfam Pleckstrin homology domain 101 221 - -
Bva06g02792 807 Gene3D - 94 227 IPR011993 -
Bva06g02792 807 Gene3D - 517 692 - -
Bva06g02792 807 Coils Coil 295 315 - -
Bva06g02792 807 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 3 801 IPR000648 GO:0008289
Bva06g02792 807 MobiDBLite consensus disorder prediction 314 342 - -
Bva06g02792 807 SUPERFAMILY PH domain-like 96 225 - -
Bva06g02792 807 Gene3D - 728 790 - -
Bva06g02792 807 SMART PH_update 94 227 IPR001849 -
Bva06g02792 807 Coils Coil 736 756 - -
Bva06g02792 807 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 3 801 - -
Bva06g02792 807 CDD PH_ORP_plant 96 231 - -
Bva06g02792 807 ProSiteProfiles PH domain profile. 93 225 IPR001849 -
Bva06g02792 807 MobiDBLite consensus disorder prediction 343 359 - -
Bva06g02792 807 SUPERFAMILY Oxysterol-binding protein-like 426 803 IPR037239 -
Bva06g02792 807 Pfam Oxysterol-binding protein 431 786 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02792 Bva-Chr6 17534775 17540864 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02792 K20456 - gmx:100137077 1325.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02792 06 17534775 17540864 Bva06g02792 06 17534775 17540864 ECH