Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02772 ATGGCTGCCTTGCTTTCTAATCAGTCTCTATTTGCTTCCAGTCCTTGTTCTTCTTCACTTACTTCAAGGCcctttaaaaccctaaaacccaAATTCCAACCTTTGCCATCTCTTTCCTATGCCAATCTTCGTCACCTAGTTTGTGCCTGCAGATCTTTCGTTGGGTTTGCTAACAAGTGTTCCCTGGGTTGCAACGTTAATCGAAGGAGTATCTTCAAGTCTTATTTCGCTGCGCAGGATCCCATTTCAAATACAAATGATGAAAGGGAGGACGTTCATCGTGATATAAAAGAGGAAGGTGATGAACAAGATCAGTATCCTCTACCTAGTTTAATGGCCCTCATTAAAGCGTACAGGGAAGCTATTATTTATCGAGACGAGGAGACTGTATCTCAGATTGAAGCGGGGATTTACTCAAtagcaaataaaagaaatcaactgTTGGAAAAATTATCATCTTTATCAGAAGAGAAACTTGCTTCTAAGGAGAAATGTCTTCGCCTTCAAGcagattttgataattttaggaAAAGATCTGAGAAAGAAAGACTCAATATCCAGTTTGATGCCCAAGCAGAAGTTATTGAAAGACTTCTGCAGATGGTGGACAATTTTGACAgagccaaacaaaaaattaaaccagcaacagagaaagaaaaaaagattaatacaAGTTATCAAGGTATCTACAAGCAATTTGTAGAGGTTATGAGGAGCCATCATGTTTCTGCGGTAGCAACAGTGGGCAAGCCTTTTGATCCTTCTGTGCATGAAGCCATTGCACGGGAGGAGTCACAAGATTTCAAGGAAGGGATTATAATTCAAGAATCTCGGCGTGGTTTTTTGCTTAGAGGTCGACTTCTGAGGCCAGCGCTGGTCAAGGTCTCCTCAGGGCATGGAAATAAGAAATCTACAGGGCCTCCTGGCAAATCCAAAGAGCAGCCTGCAACAGCTGCTGGAATGGATGAAAGATA 974 0.3778 MAALLSNQSLFASSPCSSSLTSRPFKTLKPKFQPLPSLSYANLRHLVCACRSFVGFANKCSLGCNVNRRSIFKSYFAAQDPISNTNDEREDVHRDIKEEGDEQDQYPLPSLMALIKAYREAIIYRDEETVSQIEAGIYSIANKRNQLLEKLSSLSEEKLASKEKCLRLQADFDNFRKRSEKERLNIQFDAQAEVIERLLQMVDNFDRAKQKIKPATEKEKKINTSYQGIYKQFVEVMRSHHVSAVATVGKPFDPSVHEAIAREESQDFKEGIIIQESRRGFLLRGRLLRPALVKVSSGHGNKKSTGPPGKSKEQPATAAGMDER 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02772 324 PANTHER GRPE PROTEIN 1 315 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bva06g02772 324 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 145 240 IPR013805 -
Bva06g02772 324 PRINTS GrpE protein signature 249 264 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bva06g02772 324 PRINTS GrpE protein signature 276 295 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bva06g02772 324 PRINTS GrpE protein signature 166 182 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bva06g02772 324 PRINTS GrpE protein signature 194 209 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bva06g02772 324 MobiDBLite consensus disorder prediction 294 324 - -
Bva06g02772 324 ProSitePatterns grpE protein signature. 252 295 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bva06g02772 324 Gene3D Head domain of nucleotide exchange factor GrpE 242 296 IPR009012 GO:0006457
Bva06g02772 324 Coils Coil 144 164 - -
Bva06g02772 324 Hamap Protein GrpE [grpE]. 79 297 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bva06g02772 324 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 244 298 IPR009012 GO:0006457
Bva06g02772 324 MobiDBLite consensus disorder prediction 1 22 - -
Bva06g02772 324 Gene3D - 125 238 IPR013805 -
Bva06g02772 324 Pfam GrpE 142 296 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bva06g02772 324 CDD GrpE 162 295 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bva06g02772 324 PANTHER GRPE PROTEIN HOMOLOG 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02772 Bva-Chr6 17420772 17423896 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02772 K03687 - gmx:100809893 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02772 06 17420772 17423896 Bva06g02772 06 17420772 17423896 ECH