Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02761 ATGGGTTCTTTCTTGAGTATGGCTAGTACCAAGTCTAATAGAATTGAGTGTGATGAGATCCGTCAGAATGAGGAGACTTGCAAGAGACAAAAAATGTCTTCTGCCTTTGAGAAGGACAGTCCGAGATTAATTCCAAGTCTCCCTGATGAGTTGTCACTTCAAATTATTGCTAGACTTCCTAGAATTTGCTACTTCAATCTGAGACTGGTATCGCAGAAGTGGAAGGCAACTGTCATGAGTTCTGAACTATataaactaagaaaagaaCTTGGAACAACTGAAGAGTGGGTATATCTGTTGATTAAGGTTGGAGGAGATAAGCTGTTGTGGTATGCTCTAGACCCACTTTCTCGGAAATGGCTGAGACTGCCTACTATGCCCAATGATGTTGACGAAGAAGAATCTAGAAAGGGTTCTTCTAGGCTTTGGATGTGGAACGTGGTGGAGGGGATTAGAATTGCTCAAGTTATTAGAGGTTTGCTTGGACAGAAGGAAGCATTGGATGAAATGCCCTTTTGTGGCTGTGCCGTTGGAGCTGTTAATGGATGCCTCTACGTTCTTGGTGGATTCGCTAAGGCTTCAACCAAGAGATGTGTCTGGAGATTTGATCCAATACAAAATACATGGAGCAAGGTGACTTCTATGTCTACAGCTAGGGCATATTGCAAGACAGGAATCTTAAATAACAAGCTTTATGTTGTTGGAGGTGTTAGTCAAGGTCAAGGGGGATTGATTCCTCTTCAGTCTGCGGAAGTTTTTGACCCCTGTACTGATACATGGTCCAATGTACCAAGCATGCCATTCTCAAGAGCTCGCTTCCTACCCACTGCTTTTTTGGCTGACATGTTAAAGCCCATTGCCACCGGATTGACCTCGTACAAGGCTGGGATGGGCGAGGGTTGGCCGGCACGGCAAGCAGGTACTAAATTGAGTGTTGTAGTGGATGGCGaattatatgcatttgatCCTTCTAGTTCTCTGGATAGCGGAAAGATCAAGGTATATGATCAAGGAGAAGATGCGTGGAAAGTAGTTATTGGAAAAGTCCCTATCTATGATTCTGTTGATTCAGAGTCTCCATATTTACTTGCTGGTTTCCATGGAAAGCTTCATGTCATTACAAAAGATGCCAATCATAATATTGCTGTTCTGCGGGCTGACCTGCGCAGGGATTTGGATTCATCACCATCAACCTCAACTACTCCACCACCTAATACCGTACGTGAATTTACTGAACCGGTTACAGAATCGGATGCAGTTATTTGGAGAGTAGTCGCCAATAGGGATTTCGGAGCAGCTGAATTAGTCAGTTGCCAAGTTATTGATATATA 1331 0.429 MGSFLSMASTKSNRIECDEIRQNEETCKRQKMSSAFEKDSPRLIPSLPDELSLQIIARLPRICYFNLRLVSQKWKATVMSSELYKLRKELGTTEEWVYLLIKVGGDKLLWYALDPLSRKWLRLPTMPNDVDEEESRKGSSRLWMWNVVEGIRIAQVIRGLLGQKEALDEMPFCGCAVGAVNGCLYVLGGFAKASTKRCVWRFDPIQNTWSKVTSMSTARAYCKTGILNNKLYVVGGVSQGQGGLIPLQSAEVFDPCTDTWSNVPSMPFSRARFLPTAFLADMLKPIATGLTSYKAGMGEGWPARQAGTKLSVVVDGELYAFDPSSSLDSGKIKVYDQGEDAWKVVIGKVPIYDSVDSESPYLLAGFHGKLHVITKDANHNIAVLRADLRRDLDSSPSTSTTPPPNTVREFTEPVTESDAVIWRVVANRDFGAAELVSCQVIDI 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02761 443 MobiDBLite consensus disorder prediction 393 411 - -
Bva06g02761 443 Gene3D - 68 354 IPR015915 GO:0005515
Bva06g02761 443 SUPERFAMILY Kelch motif 101 373 IPR015915 GO:0005515
Bva06g02761 443 Pfam F-box domain 45 84 IPR001810 GO:0005515
Bva06g02761 443 Pfam Kelch motif 171 216 IPR006652 GO:0005515
Bva06g02761 443 Pfam Kelch motif 218 267 IPR006652 GO:0005515
Bva06g02761 443 SMART kelc_smart 183 229 IPR006652 GO:0005515
Bva06g02761 443 SMART kelc_smart 230 280 IPR006652 GO:0005515
Bva06g02761 443 SMART fbox_2 47 87 IPR001810 GO:0005515
Bva06g02761 443 SUPERFAMILY F-box domain 42 115 IPR036047 GO:0005515
Bva06g02761 443 MobiDBLite consensus disorder prediction 392 411 - -
Bva06g02761 443 ProSiteProfiles F-box domain profile. 41 87 IPR001810 GO:0005515
Bva06g02761 443 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 295 443 - -
Bva06g02761 443 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 3 294 - -
Bva06g02761 443 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 295 443 - -
Bva06g02761 443 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 3 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02761 Bva-Chr6 17363158 17365603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02761 37 265 Miscellaneous Gene Families AT4G33900 26.695 1.23e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02761 - - gmx:100806691 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02761 06 17363158 17365603 Bva06g02761 06 17363158 17365603 ECH