Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02758 ATGGCATTTCGTTTTCTGCTCTGTTTATTACTTGTCAATGTTCTGGTGGACAGGGCGATCGcactcaaattttctttgaagctTATACACCGATATTCTGACGAGGCTATGGTTCTCTGGGTCTCCAGGAATAAGAATGTGTCGGTTGAGTCCTGGCCCAATAAGAATAGCTCCGACTATTTCAAGTTGCTCTTGAGCAGTGATTTGACACGCCAGAAAATGAAGCTCGCTTCTCAGTACAACTTTCTGTATCCTTCTCAGGGAAGTCAGACGTTGTTCTTCGGAAATGCCTTTGATTGGTTGCATTACGCATGGATTGATTTAGGGACTccaaatgtttcttttcttgttgcgCTGGATACTGGAAGTGATCAGCTTTGGGTCCCTTGTGACTGCATAGAATGCGCGCCCCTATCTGCTGGTTACTACAATGTGCTAGATAGGGATCTGAGTGAGTACAGCCCATCATTATCAAGTACTAGCAGACATCTACCTTGCAGCCATCAGTTGTGTGATCAGGGTCCCAATTGTAAAAGTCCTAAGGAGCCTTGCCCTTATATTGTTCAGTACTCATCCGAGAACACCTCAAGTTCTGGATTTCTTATTGAAGACAAGTTACATTTGGCATCAGATGGCAGATATTCAACTGAAAGTTCCGTGCAAGCCTCAATTATTTTAGGTTGTGGTAGGAAACAAAGTGGTGGTTATTTAGAAGGAGCTGCTCCTGATGGTGTTATGGGGCTGGGACCTGGCGGCATTTCAGTGCCAAGTTTCCTGGCGAAGGCAGGACTTATTCGGAATTCTTTctcaatttgttttaataacaATTCTGGGAGAATTCTTTTTGGTGACCAAGGGCATGCCCCCCAGCAGTCTACTCCTTTCTTGCTTGTGGATGGAGACTTTATCGCCTATATTGTTGGAGTGAAGAGCTTCTGTGTTGGGAGTTCCTGTCTTAAGCAAACTGGATTTCAAGCACTTATTGATAGTGGCACTTCTTTCACATATCTTCCCAGTGAAGTTTATAAAAGGGTTGTTTTGGAGTATGACAAACAATTTAATGCAAGACGGATTATCAGCCAACAATACCCATGGGAGTACTGCTACAATGTCAGTTCGCGGGAGTTGACTCACATTCCCACAGTGAAACTCTCGTTTGCTAAGAATCAAACTTTTTTGATTCACAATCCCATGTTTTCTCATACTGCCAATCAGGAATATACTCTCGTTTGTTTGACTGTAATGCCAACTGATGACGATTATGGTACCATTGGGCAGAACTTCATGATGGGCTATAACATGGTCTTTGATAGGGAAAATTTACGGTTTGGTTGGTCCAATTCCAACTGTGAAGACAACACGGGGGATAGAGCAAATTTCACTTCATCATCGAATGAAGGATCATCAAACCTTCTACCAGCGAATCAGCAGCAGAGTATCCCTAATACAACTGCTGTATCACCTACTGTTGCTGGAAAGGCTTCACCTAAACCCTCTATAGCCACACTCAGACCCGTTCCCTCTTGGTATTCATTAAGTTCTCTCTCACTAATGTACATCCTTTTCTTCTGCTTATCTCATCGACTCTTCTA 1592 0.4177 MAFRFLLCLLLVNVLVDRAIALKFSLKLIHRYSDEAMVLWVSRNKNVSVESWPNKNSSDYFKLLLSSDLTRQKMKLASQYNFLYPSQGSQTLFFGNAFDWLHYAWIDLGTPNVSFLVALDTGSDQLWVPCDCIECAPLSAGYYNVLDRDLSEYSPSLSSTSRHLPCSHQLCDQGPNCKSPKEPCPYIVQYSSENTSSSGFLIEDKLHLASDGRYSTESSVQASIILGCGRKQSGGYLEGAAPDGVMGLGPGGISVPSFLAKAGLIRNSFSICFNNNSGRILFGDQGHAPQQSTPFLLVDGDFIAYIVGVKSFCVGSSCLKQTGFQALIDSGTSFTYLPSEVYKRVVLEYDKQFNARRIISQQYPWEYCYNVSSRELTHIPTVKLSFAKNQTFLIHNPMFSHTANQEYTLVCLTVMPTDDDYGTIGQNFMMGYNMVFDRENLRFGWSNSNCEDNTGDRANFTSSSNEGSSNLLPANQQQSIPNTTAVSPTVAGKASPKPSIATLRPVPSWYSLSSLSLMYILFFCLSHRLF 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02758 530 Gene3D Acid Proteases 284 461 IPR021109 -
Bva06g02758 530 ProSiteProfiles Peptidase family A1 domain profile. 102 446 IPR033121 -
Bva06g02758 530 Pfam Xylanase inhibitor C-terminal 322 446 IPR032799 -
Bva06g02758 530 PANTHER ASPARTYL PROTEASES 4 473 IPR001461 GO:0004190|GO:0006508
Bva06g02758 530 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 4 473 - -
Bva06g02758 530 SUPERFAMILY Acid proteases 96 451 IPR021109 -
Bva06g02758 530 Pfam Xylanase inhibitor N-terminal 104 284 IPR032861 -
Bva06g02758 530 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 326 337 IPR001969 GO:0004190|GO:0006508
Bva06g02758 530 Gene3D Acid Proteases 89 283 IPR021109 -
Bva06g02758 530 CDD pepsin_like 106 445 IPR034164 -
Bva06g02758 530 PRINTS Pepsin (A1) aspartic protease family signature 326 337 IPR001461 GO:0004190|GO:0006508
Bva06g02758 530 PRINTS Pepsin (A1) aspartic protease family signature 108 128 IPR001461 GO:0004190|GO:0006508
Bva06g02758 530 PRINTS Pepsin (A1) aspartic protease family signature 422 437 IPR001461 GO:0004190|GO:0006508
Bva06g02758 530 MobiDBLite consensus disorder prediction 454 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02758 Bva-Chr6 17349784 17354560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02758 95 451 Miscellaneous Gene Families AT1G44130 27.132 2.98e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02758 - - lang:109359439 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02758 06 17349784 17354560 Bva06g02758 06 17349784 17354560 ECH