Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02743 ATGGCGGTTGGCGCGACCCTGACTCAGTCTGATCTACTCTTCCTCGACTTGCTCAGCGAATTGTCTTTCAAAATTCGGAGGATTATGGACCAGTTCAATAACGATGATCTCGATTATGTTGTTGCTGATTATTACGACTTCCCTGAATTCGAAGACGGTGGTGACCTTTACGAAGACAATGGACCTCAAGGGAAATATGGTTCTGATTATGTGGACTCGGACTTTGAAGATGATTTTGAAATGACTAAGTCGAAGAATGATACATCTGCCATGGAAGCTAGAGCGGGGAAAGACATCCAGGGAATTCCATGGGAGAGGCTTAATTATGGCAGAGACAAATACCGTCAGACTCGGTTGAAGCAATACAAAAACTATGAGAATCTCTCGCTTTCTCGTGAGGAGCTCGAGAAGGAGTGCCTGGAAGTTGAAAAAGGGAAGAATTTCTATGATTTCCACTTTAATACGAGGCTTGTGAAATCAACTATTGTGCATTTTCAGCTGAGGAATTTGTTATGGGCAACATCGAAGCATGACGTATATCTTATGCAAAACTACTCAGTGATGCATTGGTCCTCATTGCTCAGAAGGGGTAAAGAAGTGCTTAATGTAGCCAAACCTATTGTTCCGACCCTTAAGCGCCCTGGATCTTTGGCTCAACCTTTGTCCAGAGTGCAAGTAAGTACCATGGCTGTTAAGGAAAATCTGATGGTGGCAGGTGGTTTCCAGGGTGAGCTTATTTGCAAGAATTTGAGTCAACCCGGAGTTGCCTTCTGCAGTAAAATATCTACAGATGATAATGCTATAACCAATGCAGTAGATCTTTACCGCAATCATAATGGGTTGTTGAGGGTTATGACAGCAAATAATGATGCCCAAGTTAGAGTTTTTGATGCAGAGACTTTCGCTTGTCTTGGTTGTTTCAAGTATGATTGGTCTGTTAATAATACTTCTGTTAGTCCGGATGGAAAGTTGTTTGCAATTCTTGGGGACAGTGCTGAGTGCTTGATTGCTGACGCTAACACTGGGAAGGTTACTGGGAATCTAAGAGGGCACTTGGATTATTCTTTTGCCTCTGCTTGGCACCCAGATGGACGAATATTGGCTACTGGGAATCAAGACACAACTTGCAGGTTATGGGACATAAGAAATTTGTCGCAGTCTCTAGCTGTGGTGAAGGGAAGAATGGGTGCGATAAGAGGCTTGAAATTCACATCCGATGGACGCTTTTTGGCCATGTCTGAACCAGCAGATTTTGTCCATATTTTGGACTCGCAGTCCGGTTATTTACAGGGACAAGAGATAGATTTATTTGGTGAGATCGCTGGTTTAGCTTTCAGTCCAGACACCCAGGCTCTATTTGTCGGCATTGCTGACCGCACCTATGGTAGCTTGTTAGAGTTCAACAGAACACGTTGTAACCTGTATTTAGACTCCATCTTTTA 1442 0.4341 MLRNLLWATSKHDVYLMQNYSVMHWSSLLRRGKEVLNVAKPIVPTLKRPGSLAQPLSRVQVSTMAVKENLMVAGGFQGELICKNLSQPGVAFCSKISTDDNAITNAVDLYRNHNGLLRVMTANNDAQVRVFDAETFACLGCFKYDWSVNNTSVSPDGKLFAILGDSAECLIADANTGKVTGNLRGHLDYSFASAWHPDGRILATGNQDTTCRLWDIRNLSQSLAVVKGRMGAIRGLKFTSDGRFLAMSEPADFVHILDSQSGYLQGQEIDLFGEIAGLAFSPDTQALFVGIADRTYGSLLEFNRTRCNLYLDSIF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02743 315 PANTHER OS03G0386000 PROTEIN 2 315 - -
Bva06g02743 315 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 2 315 - -
Bva06g02743 315 Gene3D - 48 297 IPR015943 GO:0005515
Bva06g02743 315 Pfam WD domain, G-beta repeat 178 215 IPR001680 GO:0005515
Bva06g02743 315 ProSitePatterns Trp-Asp (WD) repeats signature. 202 216 IPR019775 -
Bva06g02743 315 ProSiteProfiles Trp-Asp (WD) repeats profile. 183 224 IPR001680 GO:0005515
Bva06g02743 315 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 183 218 - -
Bva06g02743 315 SUPERFAMILY WD40 repeat-like 61 295 IPR036322 GO:0005515
Bva06g02743 315 SMART WD40_4 176 215 IPR001680 GO:0005515
Bva06g02743 315 SMART WD40_4 135 173 IPR001680 GO:0005515
Bva06g02743 315 SMART WD40_4 219 258 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02743 Bva-Chr6 17254346 17258273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02743 101 295 Miscellaneous Gene Families AT5G08390 26.020 5.73e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02743 - - gmx:100775453 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02743 06 17254346 17258273 Bva06g02743 06 17254346 17258273 ECH