Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02741 ATGAACAGCTTATTGAGCAAGCTCCGTAATCTGGATGCATATCCTAAAATCAACGAGGATTTCTACAGTCGCACCCTCTCCGGTGGTGTTATCACTCTTGCCTCCTCCATTGTCATGCTCTTGCTCTTCTTTTCCGAGCTACGATTGTATCTCCATGCTGTAACTGAAACAAAGTTTGTTGTGGATACTTCTAGAGGAGAAACACTACGTATCAgtTTCGATGTTACATTTCCTGCCCAACCATGTTCGATACTCAGTCTTGATGCCATGGACGTCAGTGGAGAACAACATCTTGATGTTAAACATGATATAATCAAGAAAAGATTGGACACTCATGGCAATGTAATAGAAGTAAGGCAGGATGGTATTGGTGCTCCCAAGATTGAAAGGCCTTTGCAAAGACACGGAGGCAGGCTTGAGCATAATGAGACATATTGTGGATCTTGTTATGGTGCAGAAGCGTCGGATGACGATTGTTGTAATTCCTGTGAGGAAGTACGTGAAGCATATAGAAAAAAAGGTTGGGCACTTTCAAATCCAGATGTAATTGACCAGTGCAAGAGAGAAGGGTTTTTACAAAGGATCAAGGATGAAGATGGTGAAGGATGTAATATCTATGGTTCCTTGGTAGTGAACAAGGTGGCTGGGAATTTCCATTTTGCTCCAGGGAAAAGCTTTCAGCAGTCTGGTGTTCATGTACATGACTTTCTTGCTTTTCAAAAGGAATCGTTCAATATGAGTCACCGGATTAACAGACTAGCTTTTGGAGATTATTTCCCTGGTGTTGTGAATCCTCTTGAGAGTGTGCAATGGACTCAAAAAGCACCAAGTGGGATGTATCAGTATTTTATCAAGGTTGTGCCTACGGTGTACACTGATGTGAGCGGGCACACTATTCAGTCAAATCAGTTCTCAGTGACGGAACACATCCGGAGTGGAGAAGTGGGCAGTCTTCAGTCCCTGCCTGGagtcttcttcttctatgaCCTTTCTCCAATTAAGGTTACTTTCACGGAAGAACATATTTCATTCTTGCACTTCCTAACTAACGTGTGTGCCATTGTTGGAGGTGTTTTCACTGTTTCCGGAATACTAGATTCATTTATCTACCATGGTCAAAGGGCAATcaagaagaagatggaaatCGGTAAATTCAGTTG 1160 0.4129 MNSLLSKLRNLDAYPKINEDFYSRTLSGGVITLASSIVMLLLFFSELRLYLHAVTETKFVVDTSRGETLRISFDVTFPAQPCSILSLDAMDVSGEQHLDVKHDIIKKRLDTHGNVIEVRQDGIGAPKIERPLQRHGGRLEHNETYCGSCYGAEASDDDCCNSCEEVREAYRKKGWALSNPDVIDQCKREGFLQRIKDEDGEGCNIYGSLVVNKVAGNFHFAPGKSFQQSGVHVHDFLAFQKESFNMSHRINRLAFGDYFPGVVNPLESVQWTQKAPSGMYQYFIKVVPTVYTDVSGHTIQSNQFSVTEHIRSGEVGSLQSLPGVFFFYDLSPIKVTFTEEHISFLHFLTNVCAIVGGVFTVSGILDSFIYHGQRAIKKKMEIGKFS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02741 386 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Bva06g02741 386 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 2 385 IPR045888 -
Bva06g02741 386 PANTHER ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 2 385 - -
Bva06g02741 386 Pfam Endoplasmic reticulum vesicle transporter 149 366 IPR012936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02741 Bva-Chr6 17238348 17243587 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02741 K20367 - gmx:100782309 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02741 06 17238348 17243587 Bva06g02741 06 17238348 17243587 ECH