Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02728 ATGCAAACGCGAGGGTTTCCGAACTTGAAGAATCTGGATCAATTCAAATCGTTATATGGTTCAGCATCTGGAGCTGCAAAGACATTATCCATACCTTCACGTCCTTCAACAGATTCCAAATCATGTGGAAATTTTACAAACCTGAAGCTCACTGCagAGAAATTGATGAAAGAACAAGCTTCTGTGAAGAGTGATCTGGAAATTGCGAATGCTAAACTGAAGAAATCGCTGGAGCATGTCCATTTATTGGAGGAAAAATTGCAGAATTCCTTTAACGAAAATTCCAAGCTCAAGGTCAAGCAGAAAGAGGATGAGAAACTCTGGAAAGGACTGGAGTCTAAGTTCTCATCAACGAAGACTTTGTGTGATCAACTCACAGAGACTTTACATCAGTTGGCTAGTGTAGTTCAGGCAGCTGAGAAGGACAAGGAATTTTTGGAGAATAAACTATCAACAAGTTCAGAAGTTCTTGAAAGTTTGAATAAACAGATGCATGATCTGTCTTTGAACCTAGATTCTGCAGtggaaacaataaaaattcGTGATAAGGAGCTGGAGGAACTCAAATTTGAGAGAGCAGAACGGGAAAAGGCTCACAGAGATGAACAGTGCAGAGCTGCCAATCTTTTGCAAGAGAAAGATACACAgataaagaattttgaagaattGTTAGCAGCTGATAAATCAACAACAGAGAATTTAAACTCAAAGTTGGTTGAGGTGCACCTTCAGTTACAAGTCACAGAAGATGAAATAAGGCATCACATAATCACTCAAGAGAAactggagaaagaaaatagtgatCTTCAATTGTGCAATGCTGCAATTACGGAAAAACTTAACGTGGCACTTCAGGAAATCAAAGACCTTGAAGGATTGCTTGAAGCCTTGGCTGGACGTTTGGTTGAATTAGACAGAGAAAACTTGAAGTTCTTGAGCAAGTTTGATAAACTAAACTCTCTCTATACTTCTTACTTCAGGCTGGTTCAGGTTGAGAAAGATGCCATCTCTAGTTGTGCTCAAAATCAGTACGATAAACTGAATAATAGATTCTTGAGCTTGATGTCAGAAAAAGATGCAATTCAATCGAATAATCAGGAGTTAAGTAGTAATGTTTCTGAACTTCAGAAAGTCCTAGAGTTTACCAAGGTCCAGTGTACAGAGGAACTCCGATTAGCTGCTGAAAGAATCCAGATTTTAGAGTCAGATGCTGAAACTTTAATGTCAAAGAAGGCAGAAGCAGAGGTCTTGATTTCCAAATTAgaggagaaaattaaaatgctaGCAGAAAGTTGTGGATCATCGGAGAAGCAGATTCAAGATTTGTTGCTGAAAATTTCAGCATTTGAAactgaaaacaaagaaaatacagaAAGACTGCAGGCAGATATATTGAAGAAATCAGAGGAAATAGACATTTTGCAGAAGGAGCGTATGAAACTTGAGCAGCATACTGATTCCTTGGAGAAACAAGTTAGCCAGCTTCATAATGTCTTAGAGGAAAAAGAACAACTTATTTTGCATTATAAGGAGCAAGAAAAGCGGCTGGAAGATCAGATCAAAGAGAATCAGTTATCATTGACTGATGctgaaaataaacttttggAAGCTAAGAAGCAATATGAGTTAATGGTAGAGAATAAACAGTTAGAATTATCAAGGCATCTGAAGGAAATTTCTCAGAGGAATGATCAGGCAATAAATGACATCAGGAAGAAGTACGAACTGGAGATGATGGAAATAGCGAATAAGGAAAAAGACAAGGCTGACAAGGCgattgaagaaattgaaggacGATGCAACCAAAAACTTGCAGAATGCAAAGAAGAATCAAGACAACAGTTGATAAGCATTCAGAATGAAAATGCTACTCTGGTCGATCAAATACAGCAGGAGCATGACAGAAAGCAACTAGGCCTTTTAGCTGAACACATTGAACAGCTAAAACGTGCGCAGCTGCAAGCTGAAAGTGAACTAAGAGAGAAAACAACATCGCTAAAGAATGAACATGAAGCTCAGATGAAAGCATTAAGGTGTGAACTTGAAGATGAGATTCAGAAGATGCAAGAGGAGTTGCATCTCCAGAAATCAAAAGAAGATAGGCAAAGGGCATTGTTGCAGTTGCAATGGAAAGTGATGAGTGACAAGCCAAAAGAGGACCAAGAAGTGAATTCAAAGCAGGATTACTCGGTTTCAACCATTAAGAGGAGAAGTTCTGCTGGTGGCAAAAGAAGTCATCATGCTCTAAATTCTCCATCATTCCTTGAAGTAACACAAACACCAATGTCAAAGTTGTTGAAGAAAGTGGAGAATGTAAAGACAGGAAGTACAATGAGCGTTCCTAAGCGTCATAGTAAGGTAACTCACCATGAATATGAAGTTGAGACTTCCAATGGAAGAACAATCAAGCGAAGGAAAACAAGAATCATGTTTGAGGACCCAagaaaacataacaaaaatacaCCTGAAGCAAGGGCCTCCCCAAGTGTTAAGGGAGTGAAGGGCAGACGCCATCCTCATCCTTCAAATATGGGTGATCTGTTTTCAGAAGGGTCCTTGAATCCATATGCAGATGATCCCTATGCATTCAATTA 2594 0.3709 MQTRGFPNLKNLDQFKSLYGSASGAAKTLSIPSRPSTDSKSCGNFTNLKLTAEKLMKEQASVKSDLEIANAKLKKSLEHVHLLEEKLQNSFNENSKLKVKQKEDEKLWKGLESKFSSTKTLCDQLTETLHQLASVVQAAEKDKEFLENKLSTSSEVLESLNKQMHDLSLNLDSAVETIKIRDKELEELKFERAEREKAHRDEQCRAANLLQEKDTQIKNFEELLAADKSTTENLNSKLVEVHLQLQVTEDEIRHHIITQEKLEKENSDLQLCNAAITEKLNVALQEIKDLEGLLEALAGRLVELDRENLKFLSKFDKLNSLYTSYFRLVQVEKDAISSCAQNQYDKLNNRFLSLMSEKDAIQSNNQELSSNVSELQKVLEFTKVQCTEELRLAAERIQILESDAETLMSKKAEAEVLISKLEEKIKMLAESCGSSEKQIQDLLLKISAFETENKENTERLQADILKKSEEIDILQKERMKLEQHTDSLEKQVSQLHNVLEEKEQLILHYKEQEKRLEDQIKENQLSLTDAENKLLEAKKQYELMVENKQLELSRHLKEISQRNDQAINDIRKKYELEMMEIANKEKDKADKAIEEIEGRCNQKLAECKEESRQQLISIQNENATLVDQIQQEHDRKQLGLLAEHIEQLKRAQLQAESELREKTTSLKNEHEAQMKALRCELEDEIQKMQEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSVSTIKRRSSAGGKRSHHALNSPSFLEVTQTPMSKLLKKVENVKTGSTMSVPKRHSKVTHHEYEVETSNGRTIKRRKTRIMFEDPRKHNKNTPEARASPSVKGVKGRRHPHPSNMGDLFSEGSLNPYADDPYAFN 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02728 864 Coils Coil 579 628 - -
Bva06g02728 864 Coils Coil 358 385 - -
Bva06g02728 864 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 1 857 - -
Bva06g02728 864 Coils Coil 457 558 - -
Bva06g02728 864 Coils Coil 273 307 - -
Bva06g02728 864 Coils Coil 390 438 - -
Bva06g02728 864 Coils Coil 641 687 - -
Bva06g02728 864 PANTHER SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED 1 857 - -
Bva06g02728 864 MobiDBLite consensus disorder prediction 812 864 - -
Bva06g02728 864 Coils Coil 181 201 - -
Bva06g02728 864 Coils Coil 52 86 - -
Bva06g02728 864 Coils Coil 122 177 - -
Bva06g02728 864 MobiDBLite consensus disorder prediction 715 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02728 Bva-Chr6 17152622 17160056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02728 - - gmx:100788684 1155.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02728 06 17152622 17160056 Bva06g02728 06 17152622 17160056 ECH