Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02727 ATGCGCGGTGATGGGAGCAAAGTCGAGGGCGCTATTTTCCGGTTTTCCCTCTGCAATGACGCTCAGACCTCTTCATTCACTGGAGGGGGATTATTTCTCGAGCCTGGAATTCCTGATTCGTTTGCTAGTTTAATTTCTTCGAGAATTTCTAACAATACCACTCCTGGTTCTGTTTATTCTGCATTCTGTCCCCAGCATTCGGTGGTTTTCCGGCGACGGAGGAGGGTTCTGGCTTCAGCTGGTGGTTGGTTTTTATCGGTTAGCTTGAGAAGCGGTAAATATGTTGGGGAACAGAAGGTATTCTTGGAACAAAATGGAGACGCCGGACCCAAGAAGGCAACAACTCGCGATGGCGGCAATACTGTTATTGAGCAAGGGAATAAGCAGAAGGTCAATATACGGGGAGGCGCCGCCATGAACACCACCAAGCATCTATGGGCCGGCGCTGTAGCTGCAATGGTTTCtagAACTTGCGTTGCCCCCTTTGAAAGGCTAAAGCTGGAATACATAGTCCGTGGTGAGCAGAAGACTATAGTTGAGCTCATTAAAACAATTGCTGCTTCTCAAGGATTGAGAGGCTTTTGGAAAGGGAACCTTGTAAATATTCTCCGAACAGCACCATTTAAAGCAGTTAACTTTTGTGCTTATGATACGTATAGAAAGCAACTACTCAGATTCTCTGGGAATGAGGAAACTACCCATTTTGAGAGGTTTATTGCTGGTGCTGCAGCTGGGATAACGGCTACCGTTATCTGCTTGCCACTTGATACTATCCGGACCAAGCTAGTAGCTCCGGGTGGGGAAGCATTGGGTGGTGTAATTGGCGCGTTCCGCTACATGATCCAAACTGAAGGATTCTTTTCCCTGTACAAGGGCTTAGCACCATCAATTTTAAGTATGGCTCCTTCTGGTGCAGTTTTCTATGGGGTGTATGATATTCTAAAAACAGCATATCTTCATTCACccgaaggaaagaaaagaatccaGAACTTGTACAAACAGGGGCAGGAGCTGAATGCCTTGGACCAACTCGAGTTGGGGCCAATGAGGACATTGCTCTACGGGGCGATTGCTGGTGCATGTGCAGAAGCTGCTACATACCCATTTGAAGTGGTAAGGAGACAGCTTCAATTGCAAGTCCAGTCGACGAAACTAAGTGCTCTAGCAACTTGTATCAAAATAGTGGAACAGGGAGGCATTCCAGCTCTCTATGCAGGACTAATTCCCAGCTTATTACAGGTACTTCCTTCAGCTTCAATAAGTTACTTCGTCTATGAGTTCATGAAAATTGTACTCAAAGTGGAGTA 1307 0.4552 MRGDGSKVEGAIFRFSLCNDAQTSSFTGGGLFLEPGIPDSFASLISSRISNNTTPGSVYSAFCPQHSVVFRRRRRVLASAGGWFLSVSLRSGKYVGEQKVFLEQNGDAGPKKATTRDGGNTVIEQGNKQKVNIRGGAAMNTTKHLWAGAVAAMVSRTCVAPFERLKLEYIVRGEQKTIVELIKTIAASQGLRGFWKGNLVNILRTAPFKAVNFCAYDTYRKQLLRFSGNEETTHFERFIAGAAAGITATVICLPLDTIRTKLVAPGGEALGGVIGAFRYMIQTEGFFSLYKGLAPSILSMAPSGAVFYGVYDILKTAYLHSPEGKKRIQNLYKQGQELNALDQLELGPMRTLLYGAIAGACAEAATYPFEVVRRQLQLQVQSTKLSALATCIKIVEQGGIPALYAGLIPSLLQVLPSASISYFVYEFMKIVLKVE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02727 435 Gene3D Mitochondrial carrier domain 136 434 IPR023395 -
Bva06g02727 435 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 24 435 - -
Bva06g02727 435 Pfam Mitochondrial carrier protein 140 224 IPR018108 -
Bva06g02727 435 Pfam Mitochondrial carrier protein 232 319 IPR018108 -
Bva06g02727 435 Pfam Mitochondrial carrier protein 346 432 IPR018108 -
Bva06g02727 435 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 317 IPR018108 -
Bva06g02727 435 SUPERFAMILY Mitochondrial carrier 139 428 IPR023395 -
Bva06g02727 435 PANTHER SOLUTE CARRIER FAMILY 25 24 435 - -
Bva06g02727 435 ProSiteProfiles Solute carrier (Solcar) repeat profile. 139 222 IPR018108 -
Bva06g02727 435 PRINTS Mitochondrial carrier protein signature 197 217 IPR002067 GO:0055085
Bva06g02727 435 PRINTS Mitochondrial carrier protein signature 290 308 IPR002067 GO:0055085
Bva06g02727 435 PRINTS Mitochondrial carrier protein signature 355 377 IPR002067 GO:0055085
Bva06g02727 435 PRINTS Mitochondrial carrier protein signature 157 171 IPR002067 GO:0055085
Bva06g02727 435 PRINTS Mitochondrial carrier protein signature 247 265 IPR002067 GO:0055085
Bva06g02727 435 PRINTS Mitochondrial carrier protein signature 144 157 IPR002067 GO:0055085
Bva06g02727 435 ProSiteProfiles Solute carrier (Solcar) repeat profile. 346 431 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02727 Bva-Chr6 17147195 17151025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02727 1 414 Organic Solute Cotransporters AT5G64970 63.636 5.06e-168 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02727 - - vvi:100255796 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02727 06 17147195 17151025 Bva06g02727 06 17147195 17151025 ECH