Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02681 ATGAGTATCGGAGAAGAGCAACCCCTGTTGGCGTCAACTCCGTCTCAAGACCACACTCTAGTTCGTGAGTCGAACACTGATTCTCTAATCGGAGAAACATGTTTAGAACTAAACAAGATCTGGAAAATAGCGGGTCCCTCTATCTTCAGCCGCCTTGCATTGTTCTCCATGACCGTTATTACTCAATCCTTCGCCGGCCATCTCGGTAATACTGACCTCGCGGCCATCTCCATTGCCTGCACCTTTATAATCTCCATCACCTTCGGTTTCTTGCTCGGCATGGCGAGTGCGCTTGAAACCCTCTGCGGCCAAGCTTATGGCGCCAAACAGTACCACTTGTTGGGCATCTATCTGCAACGTTCTTGGGTCGTTCTCTTCCTATCTTCAATTCTGTTAGTGCCTTTGTTTGTTTATACCTCACCTATATTGAAGTTCGTCGGGCAACCAGCGGCGGTGGCGGAGCAAACCGGTTTGGTGGCGATTTGGTTGATCCCATTTCACTTGAGCTTCCCATTTCAGTTCTCGCTGCAGAGATTCTTGCAATGCCAGCTGAAAACTGCCGTCATAGCATGGGTTTCGGGGGGTGCTCTGGCAATCCATGTACTGGTGAGCTGGatttttgtttacaaattGGAAGTTGGGATCGTTGGAGCTGCACTTACTCTGGATTTCTCTTGGTGGGTCTCAGTTTTGGGGCTACTGGGGTACACCGTTTTTGGTGGGTGTAAAGAGTCATGGAATGGTTTTTCTGCTGAAGCTTTCGTTGGGCTATGGGAATTCTTCAAACTTTCTGCGGCATCTGGGGTCATGCTCTCGTTAGAGAACATGTATTACAGATTTTTGGTTATAATGTCTGGGTATATGCACAACACTGAGGTGGCGATTGATGGTCTTTCCATTTGTGTTACTATCCTTGCTTGGGAATCCATGATACCTCTCGGATTTTTGGCTTCGACTGGGGTACGTGTTGCAAACGAGCTTGGTGCAGGGAATGTGAAAGGGGCCAAGTTTGCAACTGTGGTATCAGTGGCGAATACCATATTGGTTGGATTTGCATTTTGGTTGATAATCGTGTGCTTTAGTGAGGAACTTGCTTTGATCTTCACATCAACCTCGTCTGTTATAAGAATGGTCAATAAACTGGCAACGTTACTGGCTTTTACTGTTCTTCTGAATTGCGTACAACCAGTTCTTTCAGGGGTAGCAGTTGGATCTGGATGGCAAGCATTAGTGGCTTATATAAGCATTGGCAGTTACTATTTGGTGGGTATCCCTATGGGGATTCTCCTAGGCTGGTTGCTACCTTCGGGTATAACTGGTGTGTGGACTGGAATGATGAGTGGAACGGTGGTTCAAACATTGATTTTGGCGATTATTACCGTGAAGTGTGATTGGGAGAAAGAGgCACACAATGCCCAATCAAGGATTCGGCAGCGTGCAGTCAACAACAGCTG 1454 0.4677 MSIGEEQPLLASTPSQDHTLVRESNTDSLIGETCLELNKIWKIAGPSIFSRLALFSMTVITQSFAGHLGNTDLAAISIACTFIISITFGFLLGMASALETLCGQAYGAKQYHLLGIYLQRSWVVLFLSSILLVPLFVYTSPILKFVGQPAAVAEQTGLVAIWLIPFHLSFPFQFSLQRFLQCQLKTAVIAWVSGGALAIHVLVSWIFVYKLEVGIVGAALTLDFSWWVSVLGLLGYTVFGGCKESWNGFSAEAFVGLWEFFKLSAASGVMLSLENMYYRFLVIMSGYMHNTEVAIDGLSICVTILAWESMIPLGFLASTGVRVANELGAGNVKGAKFATVVSVANTILVGFAFWLIIVCFSEELALIFTSTSSVIRMVNKLATLLAFTVLLNCVQPVLSGVAVGSGWQALVAYISIGSYYLVGIPMGILLGWLLPSGITGVWTGMMSGTVVQTLILAIITVKCDWEKEAHNAQSRIRQRAVNNS 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02681 484 PANTHER PROTEIN DETOXIFICATION 19 471 - -
Bva06g02681 484 Pfam MatE 268 428 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva06g02681 484 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva06g02681 484 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 471 - -
Bva06g02681 484 TIGRFAM matE: MATE efflux family protein 46 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva06g02681 484 CDD MATE_eukaryotic 36 471 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02681 Bva-Chr6 16950354 16952698 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02681 K03327 - pvy:116141293 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02681 06 16950354 16952698 Bva06g02681 06 16950354 16952698 ECH