Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02676 ATGCGAAGCCAAGATCAAACACAAGATTGGCAACAATTGTCCTCGGCTGATGCTCTGCTAAATAGCAATCGCAGAGAACAAGCTCTTGCCGCCATTAAAAGCTCTTTGTCTAATTGCCTCTCTGAAACAAACCTTCAGTTGACAGTTTCGGGTCTCAAGTCCAAAACCAGGGGCAAGGTACGAGATATTTATGACAGTGGGGACTATCTAGTTTTAGTTCTTAACGAGACAAGTTTGTGGTGGTTTGAAAAGACCAAGCTCATAACTTCTAATGCAGTTGTATCAGCACCAGATAAAAATGTTACTATAGCAAAGAAATGCTCAGTTTTTCCAGTAGAATTTGTTGTTAGAGGGTTTTTGACTGGAACTACCGATACATCATTATGGACAGTCTACAAAAATGGCATCCGTAATTGCTGTGGGAATGTCCTCCCAGATGCAGATCATGATGTTCCTGTAACTCCTGATGAGATTATTAAAAGTGGACTTATGACTAGAACTGATTATGAAGAAGTAAGTAGAAAAGCATTAAGCTTATTCAAATATGGACAGCATGTGGCATTGGAACATGGTCTCATATTGGTGGACacaaaatatgaatttggGAAAGCTAATGATGGTTCAATTGTGTTGATTGATGAGGTGCATACTCCTGATTCAAGTAGATATTGGATTGCCAATTCATATGAGGAGCACTTTCAAAATGGTCTCGAGCCTGAAAATGTTGATAAGGAGTTTTTGAGGCTATGGTTCACAAGTCACTGCAACCCCTATGAAGATGAGGTCCTTCCTGATGCTACCCTAGATCTTGTTTGTGAATTGGCTTGGCGGTACATTTTCCTGTACGAAACCATTACAAACTCAAAGTTTGAATTTCCATTGACCGAGGAACCAATACATGATCGTATCTCACGGAATGTAGCTTCTGCACTATCATTGCCAAATTTGTGCTG 953 0.3956 MRSQDQTQDWQQLSSADALLNSNRREQALAAIKSSLSNCLSETNLQLTVSGLKSKTRGKVRDIYDSGDYLVLVLNETSLWWFEKTKLITSNAVVSAPDKNVTIAKKCSVFPVEFVVRGFLTGTTDTSLWTVYKNGIRNCCGNVLPDADHDVPVTPDEIIKSGLMTRTDYEEVSRKALSLFKYGQHVALEHGLILVDTKYEFGKANDGSIVLIDEVHTPDSSRYWIANSYEEHFQNGLEPENVDKEFLRLWFTSHCNPYEDEVLPDATLDLVCELAWRYIFLYETITNSKFEFPLTEEPIHDRISRNVASALSLPNLC 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02676 317 Pfam SAICAR synthetase 73 145 IPR028923 -
Bva06g02676 317 Pfam SAICAR synthetase 147 261 IPR028923 -
Bva06g02676 317 Gene3D Phosphorylase Kinase; domain 1 71 125 - -
Bva06g02676 317 PANTHER PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE 10 312 - -
Bva06g02676 317 ProSitePatterns SAICAR synthetase signature 1. 109 123 IPR018236 GO:0004639|GO:0006164
Bva06g02676 317 SUPERFAMILY SAICAR synthase-like 46 290 - -
Bva06g02676 317 CDD SAICAR_synt_Sc 57 286 - -
Bva06g02676 317 PANTHER BNAC03G41880D PROTEIN 10 312 - -
Bva06g02676 317 Gene3D - 143 235 - -
Bva06g02676 317 ProSitePatterns SAICAR synthetase signature 2. 194 202 IPR018236 GO:0004639|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02676 Bva-Chr6 16930221 16933235 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02676 K01923 - qsu:111997063 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02676 06 16930221 16933235 Bva06g02676 06 16930221 16933235 ECH