Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02671 ATGAAAGAGAACCAGGCTCAAACTTCCGAAGACGATTATCGATCGTCCCTTCTGGATCTCGGCAGGGCCGACATCACTGAATCCTCTAGCAAAACCCGTAGCTGCACTGGTTTGCCTGGCTCGGGGTCCGGGTCGGGTTCAATGGAGTTTCAGGCACCATACCCGGACCAAGTGCTTGAGAATGTTCTGGAGAACGTGCTGCACTTCCTCACCTCCCGTCGTGACCGGAACGCTGCCTCATTGGTCTGCAAGTCATGGTACCGTGTGGAGGCCCTCACCCGATCCGAACTCTTCATAGGCAACTGTTATGCGGTTGCGCCCCGACGCGCTATCCACCGGTTCACGCGTGTTCGTTCCGTGACGATTAAAGGGAAGCCAAGGTTCGCTGACTTCGATCTGATGCCGCCCAACTGGGGGGCCTTCTTCTCGCCATGGGTCACTGCCATGTCCAAGGCTTACCCTTGGCTCGAGAAGGTTTACCTTAAGCGCATGTGTGTGACATACAACGATCTGGGGCTTCTCGCCGAGTCCTTCCCTGGGTTCAAAGAGCTCGTCCTTGTATGCTGCGAAGGATTTGGTTCCAGTGGACTTGCCGAGGTTGCAAGCAAGTGCAGACAGCTCAGAGTACTTGATCTTGTCGAATCTGaggttgatgatgatgaagtgGATTGGCTATCTTGTTTTCCAGAGAGCCAAACCTCTCTGGAATCTCTTGTTTTTGATTGTCTGGAGTTTCCAGTAAATTTGGAGGCATTGGAGAGGCTGGTGGCTAGGTCTCCGTCGTTAAAGAAACTTAGGTTGAATCGTTTTGTTTCCATATCTCATCTCTACCGCCTCATCACTCGAGCACCGCAACTTACACATCTTGGGACGGGCTCGTTTAGTCTGTCAGAGGATGCAGCTGCTGTAGGTGATCAGGCACCAGATTATGCCTCTGCTTTTACGGCTTGCAAATCCTTAGTTTGTCTATCTGGATTTAGAGAGATTTTACCTGATTACTTACCCGCCATCCTTCCAGTATGTGCGAATCTGACATCTTTGAACTTCAGCTATGGGGAAATTAATGCGGAACAACTCAAATCAATCATACGTTACTGCCATAAACTACAGACATTCTGGGTTCTGGATTCAATATGTGACGAGGGCCTTCAAGCGGTTGCTGCAACTTGCAAGGATTTACGAGAGCTCCGTGTTTTCCCTGTGGATGGCCATGAGAATCCAGACGGGCCAGTTTCTGAGGTAGGCCTTCAAGCAATATCCGAGGGATGTAGGAAATTGCAATCGATTTTGTATTTCTGCCAAACAATGACGAATGCAGCTGTTATAGCTATGTCGAAGAACTGCCCGGATCTTGTGGTTTTTCGCCTGTGTATAATAGGACGATACCGGCCAGACCATGAGACTGGAGAACCCATGGATGAGGGTTTTGGTGCTATTGTAAAGAACTGCAAGAAGCTCACTCGACTTGCTGTATCTGGTTTACTGACTGATGTAGCTTTTTGTTACATTGGAAAGTATGGGAAACTGATTAGGACGCTGTCATTTGCCTTTGCTGGAGACACTGATATGGGTCTTAAATATGTGCTTGAAGGATGTCCTAAGCTGCAAAAACTTGAAATCAGGGATTGTCCATTTGGGGATGGAGCTTTACGCTCTGGTATGCATCATTATTACAACATGCGATTTCTCTGGATGTCTTCCTGTAGATTAACCCGTGAAGGTTGCCAAGAAGTTGCACGAGCATTGCCCAATGTGGTTTTGGAAGTGATGAGGAATGATGATGAAGGGGAAGATACTGTCGAAATCTTGTACATGTATAGGTCTATGGATGTGCCAAGGGACGATGCCCCGAAATTTGTCACCATCTTGCAGTA 1874 0.4792 MKENQAQTSEDDYRSSLLDLGRADITESSSKTRSCTGLPGSGSGSGSMEFQAPYPDQVLENVLENVLHFLTSRRDRNAASLVCKSWYRVEALTRSELFIGNCYAVAPRRAIHRFTRVRSVTIKGKPRFADFDLMPPNWGAFFSPWVTAMSKAYPWLEKVYLKRMCVTYNDLGLLAESFPGFKELVLVCCEGFGSSGLAEVASKCRQLRVLDLVESEVDDDEVDWLSCFPESQTSLESLVFDCLEFPVNLEALERLVARSPSLKKLRLNRFVSISHLYRLITRAPQLTHLGTGSFSLSEDAAAVGDQAPDYASAFTACKSLVCLSGFREILPDYLPAILPVCANLTSLNFSYGEINAEQLKSIIRYCHKLQTFWVLDSICDEGLQAVAATCKDLRELRVFPVDGHENPDGPVSEVGLQAISEGCRKLQSILYFCQTMTNAAVIAMSKNCPDLVVFRLCIIGRYRPDHETGEPMDEGFGAIVKNCKKLTRLAVSGLLTDVAFCYIGKYGKLIRTLSFAFAGDTDMGLKYVLEGCPKLQKLEIRDCPFGDGALRSGMHHYYNMRFLWMSSCRLTREGCQEVARALPNVVLEVMRNDDEGEDTVEILYMYRSMDVPRDDAPKFVTILQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02671 624 Pfam Transport inhibitor response 1 protein domain 116 161 IPR041101 -
Bva06g02671 624 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 43 622 - -
Bva06g02671 624 SUPERFAMILY F-box domain 55 89 IPR036047 GO:0005515
Bva06g02671 624 PANTHER F-BOX PROTEIN FBX14 43 622 - -
Bva06g02671 624 Gene3D - 51 94 - -
Bva06g02671 624 SMART LRR_CC_2 532 556 IPR006553 -
Bva06g02671 624 SMART LRR_CC_2 483 506 IPR006553 -
Bva06g02671 624 SMART LRR_CC_2 178 203 IPR006553 -
Bva06g02671 624 SMART LRR_CC_2 423 447 IPR006553 -
Bva06g02671 624 Gene3D Ribonuclease Inhibitor 96 623 IPR032675 -
Bva06g02671 624 SUPERFAMILY RNI-like 133 573 - -
Bva06g02671 624 MobiDBLite consensus disorder prediction 24 49 - -
Bva06g02671 624 Pfam F-box 56 95 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02671 Bva-Chr6 16909056 16912466 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02671 - - jre:108982026 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02671 06 16909056 16912466 Bva06g02671 06 16909056 16912466 ECH