Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02651 ATGACTAACAGAAGTGCCGAAGTGTCCCAGGGAGATGGCAATGCTCCCCTTCCCCCTCCTCAGCCTGGGCAACCAGATCATTTGGCTCCACGTGGCAACAATACGATTTTCAAGAGCGGGCCACTTTTCTTATCTTCAAAAGGAATTGGATGGACCTCCTGGAAGAAAAGGTGGTTTATTTTAACACGCACTTCATTAGTTTTCTTCAGAAGTGATCCAAGTGCTGCTCCTCCGAAGGCAAATGAAGTGAATTTAACCCTTGGTGGTATTGATCTCAACAGTTCAGGCAGTGTTGTAGTCAAAGCAGATAAGAAACTCTTGACAGTGGTTTTTGGTGATGGTCGCGATGGACGAACTTTCACACTTAAGGCTGAAACTACTGAGGATTTATATGAGTGGAAGACTGCACTTGAGAATGCTTTGGCACAAGCACCGAGTGCTGCTGTTGCGACGGGACAAAATGGTCTCTTCAGGAAAGATCAGACTGATTCAACTGATAATTCTTCGGACCAGTTGAAGGATAGAGAACCAGCGAAATCTACAGTCATTGGCCGCCCAATTTTACTTGCTCTGGAGGAAGTTGATGGATCTTCATCTTTTTTGGAGAAAGCCCTTAGGTTCATAGAAGATCATGGAGTCAAAGTAGAAGGGATCTTGCGACAAGCAGCTGATGTTGATGATGTAGAACGTCGAGTTCGGGAATATGAAGAAGGAAAAGTTGAGTTTTCCCCAGGGGAAGATGCACACGTTATTGGTGATTGTATCAAGCATGTACTCCGGGAACTGCCATCATCTCCAGTCCCCGCATCTTGTTGCAAAGCACTTTTAGAATCATGCAGAACTGCGCGTTCTGGTAGAGTTTCTGCTATGCGTGCAGCAGTATGTGATACTTTCCCTGAGCCAAATCGTCGTTTATTGCAAAgAATACTCATGATGATGCAACATGTGGCTTCCAACAAAAATGAGAACAAAATGAGCCCCTCGGCTGTGGCAGCCTGCATGGCTCCCTTACTTCTTCGTCCCCTTCTAGCTGGAGAGTGTGagattgaaaatgattttgatgtgggCGGCGATGGTTCTCTTCAACTTCTACAAGCAGCTGCTGCAGCCAACCATGCCCAAACTATTGTTATGACTTTACTAGAAGAGTATGACAGCATATTTGCGGAAGGTTCGACCGTGTCCCCTGATTTATACGATGATTCTGAAGATGATGGATCTGAGAGTGAAGAGGCCAGTGATGATGGATCCTAttatgatgaagatgaagaggatGATGATGGTGAGGGTTCAtattatgatgatgatgaagaacaGGACGAATCAATACATGAGTCTGATGATGAAGACGACCATGTTAGCGAAATTGGCAGCGAAAGTGGAGAATCTAATGGCACTGATGTGCATGATGATAAGGACCATGATCGTTATCGTTCAAGTTCAAGTTCAAAATCCTTACGTGTGAGCGAAGAGCTTAAAGTCAATCAAGGGGCATCAAATTCAGCTGAAGTCTCACAGCCGCAGCATGAAGATGTCAAAAGCTCCGAAAATCTCCCGACTTCAACAAAAGCTGGTAGTGCAGAACTCAGTAAGCCTGCTGAAAAATCTGAAGGTGTTCCCACAgaccaaaataataagttCGATACAAGTTGTTCTATGCCTTCGTCATGTGCTAAAAAATCTAATTGGGGGCGTACCTCCGCAAGGAAGAACCTTTCCATGGAATCTATTGATTATTCTGCTGACGAAGAGGATGAAATTGAGAGGCTTGAGGCTACTAAGACAGAATTGGAAAACCAACTTGCTCGGGAGATTGAAGGGAATAAAAAGCTGCATTCTGATCTGGATAAACGAAAGAGAGCCTTACATGAGCGTCGTTTGGCTCTTGAGAAAGATGTGGCTAGACTACAGGAACAGTTGcgaaaagagaagaatattaGGGCAACTGTTGAAGCAGGACTCAGAATTCCTCCAGGACCCTTATCCAGTTTAACCAATATTGATGAAAAGACCAAAGCAGAACTTGAGGAATTAGCTCTGGCAGAAGCAGATATTAGCGAGTTAGAGAAGAAGATTAGTGATCTTGGGGTGCGCCTTAATCTACAACGTGAAGGAAACCAGGGTTCTTCCTTGAATATCAGTAATCAACCCCAGCAGATATCAAGTCATGAAACAAAATTGAAGAATAAACCGGATAATGCAGTTACAGGCACAGCCACGCCAAAATATGAAAGGTCTAGAAGTAAGGATACTCATTCTGGAAAAGCtgaaaatgagaatgagagGAAGCTAGAATCCTCATCTACACCAAAGAAACACCCACCTTCCAAGAAGTCTGTTACAAAGGGTGAGGGAGCAAATTCAAATACCGCATTGTCAAAACTGACAAACAGACTAAACTTTTTGAAGGAGCGACGTACTCAGATAGCAAACGAACTCCCGAATATGGATAAAGGCCGGGACTCAACCAAGAAttcagaaaaaggaaagggatCTGAATCTCACCTATCCCTGCCATCCCCCAAGAAGACCAAGTCTCGAGCTTTGGAGAGTGATGAAGGTTCAGGAAAAGGAGTTCAAAATTCAgagaaacttaaaaaatcaGAGAGTCACCCAGTACAACACTCAGAAAAATGGAACCAAAATCCACAGCTCCTGGAAAGAGGAAGATCAGAAAGCCATTCATCTTTTAATGCGAATAAAGGTCgatg 2711 0.4176 MTNRSAEVSQGDGNAPLPPPQPGQPDHLAPRGNNTIFKSGPLFLSSKGIGWTSWKKRWFILTRTSLVFFRSDPSAAPPKANEVNLTLGGIDLNSSGSVVVKADKKLLTVVFGDGRDGRTFTLKAETTEDLYEWKTALENALAQAPSAAVATGQNGLFRKDQTDSTDNSSDQLKDREPAKSTVIGRPILLALEEVDGSSSFLEKALRFIEDHGVKVEGILRQAADVDDVERRVREYEEGKVEFSPGEDAHVIGDCIKHVLRELPSSPVPASCCKALLESCRTARSGRVSAMRAAVCDTFPEPNRRLLQRILMMMQHVASNKNENKMSPSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSLQLLQAAAAANHAQTIVMTLLEEYDSIFAEGSTVSPDLYDDSEDDGSESEEASDDGSYYDEDEEDDDGEGSYYDDDEEQDESIHESDDEDDHVSEIGSESGESNGTDVHDDKDHDRYRSSSSSKSLRVSEELKVNQGASNSAEVSQPQHEDVKSSENLPTSTKAGSAELSKPAEKSEGVPTDQNNKFDTSCSMPSSCAKKSNWGRTSARKNLSMESIDYSADEEDEIERLEATKTELENQLAREIEGNKKLHSDLDKRKRALHERRLALEKDVARLQEQLRKEKNIRATVEAGLRIPPGPLSSLTNIDEKTKAELEELALAEADISELEKKISDLGVRLNLQREGNQGSSLNISNQPQQISSHETKLKNKPDNAVTGTATPKYERSRSKDTHSGKAENENERKLESSSTPKKHPPSKKSVTKGEERRTQIANELPNMDKGRDSTKNSEKGKGSESHLSLPSPKKTKSRALESDEGSGKGVQNSEKLKKSESHPVQHSEKWNQNPQLLERGRSESHSSFNANKGR 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02651 884 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 9 803 - -
Bva06g02651 884 MobiDBLite consensus disorder prediction 464 481 - -
Bva06g02651 884 Coils Coil 619 646 - -
Bva06g02651 884 Gene3D Rho GTPase activation protein 165 389 IPR008936 GO:0007165
Bva06g02651 884 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 9 803 - -
Bva06g02651 884 MobiDBLite consensus disorder prediction 397 455 - -
Bva06g02651 884 Pfam Leucine-zipper of ternary complex factor MIP1 622 700 IPR025757 -
Bva06g02651 884 SMART RhoGAP_3 195 385 IPR000198 GO:0007165
Bva06g02651 884 ProSiteProfiles Rho GTPase-activating proteins domain profile. 189 388 IPR000198 GO:0007165
Bva06g02651 884 SUPERFAMILY PH domain-like 30 142 - -
Bva06g02651 884 MobiDBLite consensus disorder prediction 707 884 - -
Bva06g02651 884 CDD RhoGAP 200 334 - -
Bva06g02651 884 Gene3D - 27 143 IPR011993 -
Bva06g02651 884 ProSiteProfiles PH domain profile. 35 142 IPR001849 -
Bva06g02651 884 CDD PH 38 137 - -
Bva06g02651 884 MobiDBLite consensus disorder prediction 1 32 - -
Bva06g02651 884 SMART PH_update 36 144 IPR001849 -
Bva06g02651 884 MobiDBLite consensus disorder prediction 537 574 - -
Bva06g02651 884 MobiDBLite consensus disorder prediction 482 527 - -
Bva06g02651 884 Pfam RhoGAP domain 199 341 IPR000198 GO:0007165
Bva06g02651 884 MobiDBLite consensus disorder prediction 856 884 - -
Bva06g02651 884 MobiDBLite consensus disorder prediction 392 584 - -
Bva06g02651 884 Coils Coil 671 698 - -
Bva06g02651 884 Coils Coil 580 607 - -
Bva06g02651 884 MobiDBLite consensus disorder prediction 707 724 - -
Bva06g02651 884 MobiDBLite consensus disorder prediction 163 177 - -
Bva06g02651 884 SUPERFAMILY GTPase activation domain, GAP 200 389 IPR008936 GO:0007165
Bva06g02651 884 MobiDBLite consensus disorder prediction 152 177 - -
Bva06g02651 884 Pfam PH domain 38 141 IPR001849 -
Bva06g02651 884 MobiDBLite consensus disorder prediction 743 812 - -
Bva06g02651 884 MobiDBLite consensus disorder prediction 826 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02651 Bva-Chr6 16800117 16809140 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02651 - - gsj:114415231 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02651 06 16800117 16809140 Bva06g02651 06 16800117 16809140 ECH