Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02637 ATGGAGTGCCTGGCGGCCTTTTCTTCGACCTCCATATATACGCCTCCAGCATCCTCATTCTCCAGAAGTCGACGTTCCTTTTCTTTCGCGTGCAGAATCAAGCCCAGATCAGAGGCTATGCGCTCCTCAGAGGTGTCTCAGGCTGATCCCACCAAGCCCAAGGAGGCTAAGCTGTGGGGTGGTCGTTTCGAGGAGAGTGTGACCGATGCCGTCGAGAGATTTACAGAGTCAATCTCCTTCGATAAGGAGCTCTACAAGCATGATATTATGGGGAGTAGAGCCCATGCTTCAATGCTAGCTCAACAGGGATTGATGAGCACCAGTGATAAGGATTCTATTCTTCGAGGTCTTGATGAAATAGAGAGGCGCATTGAAAATGGTGAGTTCAATTGGAGAACTGACCGCGAAGATGTCCATATGAACATTGAAGCAGCACTTACTGATATGATTGGTGAACCTGCAAAGAAGCTACACACAGCACGTAGCCGTAATGATCAAGTTTTGACTGACTTTCGCCTCTGGTGCCGGGATGCCATTGATAAGATCGTCACCTACATCAAACGCCTTCAGGTCTCATTGCTGACCTTGGCATTGAAGAACGATGGTCTTATTGTTCCTGGTTATACTCATTTGCAGCGTGCCCAACCTGTTTTACTATCGCATCTTCTACTGGCGTATGTTGAGGAGCTTGACCGCGATAGTGGGCGTTTACTAGATTGTAGAGCTAGGATGAATTACTGCCCATTAGGAGCTTGTGCGTTGGCCGGCACTGGCCTTCCAATTGATCGATTCATGACTTCAAAAGCTTTAGGGTTTACAGCTCCACTGAGGAATAGTATAGATGCAGTTTCAGACCGAGATTTTGTGCTAGAATTTCTTTCTGCTAATGCCATCACAGCAGTGCATCTTTCTCGTCTTGGTGAAGAATGGGTATTGTGGGCTTCGGAGGAGTTTGGATTTATCACGCCAAGTGACTCTGTTTCAACTGGGAGCAGTATTATGCCTCAGAAAAAGAATCCAGATCCAATGGAACTTGTTCGTGGGAAGTCTGCCAGAGTCATAGGGGACCTGGTTACCCTTCTCACCTTGTGCAAGGGACTTCCTCATGCTTATAATCGTGATTTGCAGGAGGACAAAGAACCTGCATTTGACAGTGTTAAAACTGTTGTGGGCATGCTCGAGGTATCGGCAGAATTTGCGCTTAACATTAGCTTCAATCAGGAGAAAATACAAAAGGCTTTACCTGCTGGTCATCTTGATGCAACAACGCTTGCTGATTATCTTGTGAAGAAGGGAGTGCCATTCAGAACTGCTCATGATATTGTGGGAAGATCTGTTGCCCTGTGTGTCCCAAGGAACTGTGAACTTCGTAACCTGAGCCTTGATGAGCTGAGAAGTATAAGTGACGTTTTTGACGAGGATGTCTATGAATTTCTTGGAGTGGAGAATTCAATCGAGAAGTTCAGCTCCTATGGTTCCACTGGGTCTGCTTGTGTTGCCGACCAACTAGATTATTGGGTAGCAAAACTTGAGCTCAAATG 1541 0.4646 MECLAAFSSTSIYTPPASSFSRSRRSFSFACRIKPRSEAMRSSEVSQADPTKPKEAKLWGGRFEESVTDAVERFTESISFDKELYKHDIMGSRAHASMLAQQGLMSTSDKDSILRGLDEIERRIENGEFNWRTDREDVHMNIEAALTDMIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDKIVTYIKRLQVSLLTLALKNDGLIVPGYTHLQRAQPVLLSHLLLAYVEELDRDSGRLLDCRARMNYCPLGACALAGTGLPIDRFMTSKALGFTAPLRNSIDAVSDRDFVLEFLSANAITAVHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPHAYNRDLQEDKEPAFDSVKTVVGMLEVSAEFALNISFNQEKIQKALPAGHLDATTLADYLVKKGVPFRTAHDIVGRSVALCVPRNCELRNLSLDELRSISDVFDEDVYEFLGVENSIEKFSSYGSTGSACVADQLDYWVAKLELK 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02637 513 Hamap Argininosuccinate lyase [argH]. 57 508 IPR009049 GO:0004056|GO:0042450
Bva06g02637 513 Pfam Lyase 61 355 IPR022761 -
Bva06g02637 513 Gene3D Fumarase/aspartase (Central domain) 174 503 - -
Bva06g02637 513 Gene3D - 415 487 - -
Bva06g02637 513 PANTHER ARGININOSUCCINATE LYASE 68 510 - -
Bva06g02637 513 PANTHER ARGININOSUCCINATE LYASE 68 510 IPR009049 GO:0004056|GO:0042450
Bva06g02637 513 PRINTS Argininosuccinate lyase family signature 330 346 - -
Bva06g02637 513 PRINTS Argininosuccinate lyase family signature 156 178 - -
Bva06g02637 513 PRINTS Argininosuccinate lyase family signature 365 384 - -
Bva06g02637 513 PRINTS Argininosuccinate lyase family signature 286 310 - -
Bva06g02637 513 PRINTS Argininosuccinate lyase family signature 248 264 - -
Bva06g02637 513 PRINTS Argininosuccinate lyase family signature 197 217 - -
Bva06g02637 513 PRINTS Fumarate lyase superfamily signature 330 346 IPR000362 -
Bva06g02637 513 PRINTS Fumarate lyase superfamily signature 157 175 IPR000362 -
Bva06g02637 513 PRINTS Fumarate lyase superfamily signature 202 220 IPR000362 -
Bva06g02637 513 PRINTS Fumarate lyase superfamily signature 286 313 IPR000362 -
Bva06g02637 513 CDD Argininosuccinate_lyase 77 510 IPR009049 GO:0004056|GO:0042450
Bva06g02637 513 ProSitePatterns Fumarate lyases signature. 330 339 IPR020557 GO:0003824
Bva06g02637 513 Gene3D - 77 284 IPR024083 -
Bva06g02637 513 SUPERFAMILY L-aspartase-like 58 509 IPR008948 GO:0003824
Bva06g02637 513 Pfam Argininosuccinate lyase C-terminal 420 486 IPR029419 -
Bva06g02637 513 TIGRFAM argH: argininosuccinate lyase 58 507 IPR009049 GO:0004056|GO:0042450
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02637 Bva-Chr6 16711813 16715115 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02637 K01755 - gmx:100796544 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02637 06 16711813 16715115 Bva06g02637 06 16711813 16715115 ECH